Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4233g00018 ATGATCATCATCACTTTCATGTTCTGGTCGTCATGGTGGGCACTGAACGGCGTCGTTTCGGACCCGCAGACCAATCTTTTAAGAAAAGATTGCACTCCAGCTGGCATACTAGTGCTGCCCAACTTCTCCATCTTCAGTGACAACGTTAACGAAACGTTTGGAGAGATCAGAGAGCAGATTATGAGCATAAACAAGCACTTTGCGACGGCGCAGCAAGGTAATGGAGGAAACCCTGTTTTCAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTTGGCTGCTTCGACGCCGCCGCCAAACAAGTCCGCAATTGCCCTGCTGCTTCGCCCGGCGGCCTTGTCGTCTACGACGGCTGCTTCCTCGGGTACGAGACCACCGGTGCTTTCCTTGAACAAACAACGGAGGATTTCAATGCCGTATCGTGTAGTAGCCAGACTATGACAGGATCCACTTCGTTTACCTCACTTGCGCAGCAAATGCTAAAGAGTCTCCAAACAACAGCACCCAAGAACCAAGGGTTCTTTGCAGCCACAAGGATAGAATTGCCTGATAATAGTACAACTATTTATGCCTTTGTTCAATGTACTGAAACTATCACTCAGACTGGATGCGTCAATTGCTTGAACACTGGCTATAACAATATGCCGACTTGTCTTCCCAATTCGGAGGGTAGGGCTTATGCTTACGGGTGCTTTATGAGATACTCCACTACTTCCTTCTTTCCAGATAATTACCAGACAATTCATATTACTTCCGAGGGCAAACAAGGTTCAAATAAGAAGGGGACCATTATAGGTGTAGTTGTTGGAGTTGTAGCTTTTGTTTTGATCCTCCTTACACTATTAGCTTGGATTAAACGACCGAAAAGGCCTGAAAGATCAGTTCCTAGAGGCGACATATCCGGAGTAAGTAAGTTGAAAGGCCCAATTAATTTTAGCTATAGAGAGTTGAAGTTTGCAACTAAAAGTTTCAGTGCAGAAAATAAAGTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACCCTGAAGAATGGGAAAGCAGTTGCTGTAAAGAAGTTAACCTTACACCAGTCTAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAACTTATAAGTAATGTCCATCATCGGAATCTTATTCGGCTTCTTGGATGTTGCAGTAAAAGAAACGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTAGACAAATTCTTATTTGGTAAAAACAGAGGTTCTCTTAATTGGAAGCAACGGTATGATATAATTTTAGGAACAACAAGGGGTATAACTTATCTACATGAAGAATTTCATGTTCGTATCATACATAGAGATATAAAGGCTAACAACATTCTCTTAGATAATGATCTCCAACCAAGAATTGCTGATTTTGGCTTAGCAAAGCTTTCACCTGAAGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGATACACTGCATCAGAATATGCAATTCATGGCTTGGAAGCTATATGA 1524 0.4173 MIIITFMFWSSWWALNGVVSDPQTNLLRKDCTPAGILVLPNFSIFSDNVNETFGEIREQIMSINKHFATAQQGNGGNPVFSLFQCRNYLSVHDCVGCFDAAAKQVRNCPAASPGGLVVYDGCFLGYETTGAFLEQTTEDFNAVSCSSQTMTGSTSFTSLAQQMLKSLQTTAPKNQGFFAATRIELPDNSTTIYAFVQCTETITQTGCVNCLNTGYNNMPTCLPNSEGRAYAYGCFMRYSTTSFFPDNYQTIHITSEGKQGSNKKGTIIGVVVGVVAFVLILLTLLAWIKRPKRPERSVPRGDISGVSKLKGPINFSYRELKFATKSFSAENKVGEGGFGAVYKGTLKNGKAVAVKKLTLHQSKKVEEEFESEVKLISNVHHRNLIRLLGCCSKRNERILIYEYMKNTSLDKFLFGKNRGSLNWKQRYDIILGTTRGITYLHEEFHVRIIHRDIKANNILLDNDLQPRIADFGLAKLSPEEKSHLSTKFAGTLGYTASEYAIHGLEAI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4233g00018 507 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Pral4233g00018 507 FunFam Os07g0541700 protein 404 491 - -
Pral4233g00018 507 Pfam Protein kinase domain 328 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00018 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4233g00018 507 Gene3D Transferase(Phosphotransferase) domain 1 404 504 - -
Pral4233g00018 507 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Pral4233g00018 507 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Pral4233g00018 507 ProSiteProfiles Protein kinase domain profile. 327 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00018 507 SMART serkin_6 327 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00018 507 Pfam Salt stress response/antifungal 145 240 IPR002902 -
Pral4233g00018 507 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Pral4233g00018 507 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Pral4233g00018 507 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 503 - -
Pral4233g00018 507 SUPERFAMILY Protein kinase-like (PK-like) 308 503 IPR011009 -
Pral4233g00018 507 Gene3D - 30 130 IPR038408 -
Pral4233g00018 507 Gene3D - 137 243 IPR038408 -
Pral4233g00018 507 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4233g00018 Pral-Chr4233 232737 239465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4233g00018 65 492 Receptor kinase-like Gene Family AT1G70530 39.908 1.77e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4233g00018 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4233g00018 - - pcin:129300003 661.373