Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4233g00016 ATGATCATCATCACTTTCATGTTCTGGTCGTCATGGTGGGCACTGAACGGCGTCGTTTCGGACCCGCAGACCAATCTTTTAAGAAAAGATTGCACTCCAGCTGGCATACTAGTGCTGCCCAACTTCTCCATCTTCAGTGACAACGTTAACGAAACGTTTGGAGAGATCAGAGAGCAGATTATGAGCATAAACAAGCACTTTGCGACGGCGCAGCAAGGTAATGGAGGAAACCCTGTTTTCAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTTGGCTGCTTCGACGCCGCCGCCAAACAAGTCCGCAATTGCCCTGCTGCTTCGCCCGGCGGCCTTGTCGTCTACGACGGCTGCTTCCTCGGGTACGAGACCACCGGTGCTTTCCTTGAACAAACAACGGAGGATTTCAATGCCGTATCGTGTAGTAGCCAGACTATGACAGGATCCACTTCGTTTACCTCACTTGCGCAGCAAATGCTAAAGAGTCTCCAAACAACAGCACCCAAGAACCAAGGGTTCTTTGCAGCCACAAGGATAGAATTGCCTGATAATAGTACAACTATTTATGCCTTTGTTCAATGTACTGAAACTATCACTCAGACTGGATGCGTCAATTGCTTGAACACTGGCTATAACAATATGCCGACTTGTCTTCCCAATTCGGAGGGTAGGGCTTATGCTTACGGGTGCTTTATGAGATACTCCACTACTTCCTTCTTTCCAGATAATTACCAGACAATTCATATTACTTCCGAGGGCAAACAAGGTTCAAATAAGAAGGGGACCATTATAGGTGTAGTTGTTGGAGTTGTAGCTTTTGTTTTGATCCTCCTTACACTATTAGCTTGGATTAAACGACCGAAAAGGCCTGAAAGATCAGTTCCTAGAGGCGACATATCCGGAGTAAGTAAGTTGAAAGGCCCAATTAATTTTAGCTATAGAGAGTTGAAGTTTGCAACTAAAAGTTTCAGTGCAGAAAATAAAGTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACCCTGAAGAATGGGAAAGCAGTTGCTGTAAAGAAGTTAACCTTACACCAGTCTAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAACTTATAAGTAATGTCCATCATCGGAATCTTATTCGGCTTCTTGGATGTTGCAGTAAAAGAAACGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTAGACAAATTCTTATTTGGTAAAAACAGAGGTTCTCTTAATTGGAAGCAACGGTATGATATAATTTTAGGAACAACAAGGGATAATGATCTCCAACCAAGAATTGCTGATTTTGGCTTAGCAAAGCTTTCACCTGAAGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGATACACTGCATCAGAATATGCAATTCATGGTCAATTATTAGAAAAAGCTGACATTTATAGCTTTGGCATTGTACTCCTAGAAATTATCAGCGGTGAACAAGGCAATGAATTGAATATTCATGATGATGTTGAAGGCGAATTTCTGCTTAAGAAAGCTTGGAAGCTATATGAGAGAGGCTTACACATGGAGTTGGTGGACAATACCATGGATCCAAATGATTATAATGTAGAAGAAGTGAAGAAAATTATAGAGATTGGTCTACTTTGCACTCAAGCATCTGCTGAATTAAGGCCATCAATATCTGAAGTAATTGTTTTGCTCCAAGGCAATGGCTTATTAGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACTTAA 1785 0.4118 MIIITFMFWSSWWALNGVVSDPQTNLLRKDCTPAGILVLPNFSIFSDNVNETFGEIREQIMSINKHFATAQQGNGGNPVFSLFQCRNYLSVHDCVGCFDAAAKQVRNCPAASPGGLVVYDGCFLGYETTGAFLEQTTEDFNAVSCSSQTMTGSTSFTSLAQQMLKSLQTTAPKNQGFFAATRIELPDNSTTIYAFVQCTETITQTGCVNCLNTGYNNMPTCLPNSEGRAYAYGCFMRYSTTSFFPDNYQTIHITSEGKQGSNKKGTIIGVVVGVVAFVLILLTLLAWIKRPKRPERSVPRGDISGVSKLKGPINFSYRELKFATKSFSAENKVGEGGFGAVYKGTLKNGKAVAVKKLTLHQSKKVEEEFESEVKLISNVHHRNLIRLLGCCSKRNERILIYEYMKNTSLDKFLFGKNRGSLNWKQRYDIILGTTRDNDLQPRIADFGLAKLSPEEKSHLSTKFAGTLGYTASEYAIHGQLLEKADIYSFGIVLLEIISGEQGNELNIHDDVEGEFLLKKAWKLYERGLHMELVDNTMDPNDYNVEEVKKIIEIGLLCTQASAELRPSISEVIVLLQGNGLLENMRPTMPILIET 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4233g00016 594 Pfam Protein tyrosine and serine/threonine kinase 329 431 IPR001245 GO:0004672|GO:0006468
Pral4233g00016 594 Gene3D Transferase(Phosphotransferase) domain 1 404 587 - -
Pral4233g00016 594 Gene3D - 30 130 IPR038408 -
Pral4233g00016 594 Gene3D - 137 243 IPR038408 -
Pral4233g00016 594 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Pral4233g00016 594 ProSiteProfiles Protein kinase domain profile. 327 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00016 594 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 435 - -
Pral4233g00016 594 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Pral4233g00016 594 SUPERFAMILY Protein kinase-like (PK-like) 311 581 IPR011009 -
Pral4233g00016 594 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Pral4233g00016 594 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Pral4233g00016 594 Pfam Salt stress response/antifungal 145 240 IPR002902 -
Pral4233g00016 594 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Pral4233g00016 594 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Pral4233g00016 594 Pfam Protein kinase domain 437 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4233g00016 Pral-Chr4233 232416 239465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4233g00016 14 576 Receptor kinase-like Gene Family AT1G70520 32.333 1.77e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4233g00016 Pkinase 1.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4233g00016 - - pcin:129300003 796.964