Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4233g00015 ATGATCATCATCACTTTCATGTTCTGGTCGTCATGGTGGGCACTGAACGGCGTCGTTTCGGACCCGCAGACCAATCTTTTAAGAAAAGATTGCACTCCAGCTGGCATACTAGTGCTGCCCAACTTCTCCATCTTCAGTGACAACGTTAACGAAACGTTTGGAGAGATCAGAGAGCAGATTATGAGCATAAACAAGCACTTTGCGACGGCGCAGCAAGGTAATGGAGGAAACCCTGTTTTCAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTTGGCTGCTTCGACGCCGCCGCCAAACAAGTCCGCAATTGCCCTGCTGCTTCGCCCGGCGGCCTTGTCGTCTACGACGGCTGCTTCCTCGGGTACGAGACCACCGGTGCTTTCCTTGAACAAACAACGGAGGATTTCAATGCCGTATCGTGTAGTAGCCAGACTATGACAGGATCCACTTCGTTTACCTCACTTGCGCAGCAAATGCTAAAGAGTCTCCAAACAACAGCACCCAAGAACCAAGGGTTCTTTGCAGCCACAAGGATAGAATTGCCTGATAATAGTACAACTATTTATGCCTTTGTTCAATGTACTGAAACTATCACTCAGACTGGATGCGTCAATTGCTTGAACACTGGCTATAACAATATGCCGACTTGTCTTCCCAATTCGGAGGGTAGGGCTTATGCTTACGGGTGCTTTATGAGATACTCCACTACTTCCTTCTTTCCAGATAATTACCAGACAATTCATATTACTTCCGAGGGCAAACAAGGTTCAAATAAGAAGGGGACCATTATAGGTGTAGTTGTTGGAGTTGTAGCTTTTGTTTTGATCCTCCTTACACTATTAGCTTGGATTAAACGACCGAAAAGGCCTGAAAGATCAGTTCCTAGAGGCGACATATCCGGAGTAAGTAAGTTGAAAGGCCCAATTAATTTTAGCTATAGAGAGTTGAAGTTTGCAACTAAAAGTTTCAGTGCAGAAAATAAAGTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACCCTGAAGAATGGGAAAGCAGTTGCTGTAAAGAAGTTAACCTTACACCAGTCTAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAACTTATAAGTAATGTCCATCATCGGAATCTTATTCGGCTTCTTGGATGTTGCAGTAAAAGAAACGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTAGACAAATTCTTATTTGAGGATACACTGCATCAGAATATGCAATTCATGGCTTGGAAGCTATATGAGAGAGGCTTACACATGGAGTTGGTGGACAATACCATGGATCCAAATGATTATAATGTAGAAGAAGTGAAGAAAATTATAGAGATTGGTCTACTTTGCACTCAAGCATCTGCTGAATTAAGGCCATCAATATCTGAAGTAATTGTTTTGCTCCAAGGCAATGGCTTATTAGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACTTAA 1503 0.4251 MIIITFMFWSSWWALNGVVSDPQTNLLRKDCTPAGILVLPNFSIFSDNVNETFGEIREQIMSINKHFATAQQGNGGNPVFSLFQCRNYLSVHDCVGCFDAAAKQVRNCPAASPGGLVVYDGCFLGYETTGAFLEQTTEDFNAVSCSSQTMTGSTSFTSLAQQMLKSLQTTAPKNQGFFAATRIELPDNSTTIYAFVQCTETITQTGCVNCLNTGYNNMPTCLPNSEGRAYAYGCFMRYSTTSFFPDNYQTIHITSEGKQGSNKKGTIIGVVVGVVAFVLILLTLLAWIKRPKRPERSVPRGDISGVSKLKGPINFSYRELKFATKSFSAENKVGEGGFGAVYKGTLKNGKAVAVKKLTLHQSKKVEEEFESEVKLISNVHHRNLIRLLGCCSKRNERILIYEYMKNTSLDKFLFEDTLHQNMQFMAWKLYERGLHMELVDNTMDPNDYNVEEVKKIIEIGLLCTQASAELRPSISEVIVLLQGNGLLENMRPTMPILIET 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4233g00015 500 Gene3D Transferase(Phosphotransferase) domain 1 401 495 - -
Pral4233g00015 500 SUPERFAMILY Protein kinase-like (PK-like) 303 420 IPR011009 -
Pral4233g00015 500 ProSiteProfiles Protein kinase domain profile. 327 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00015 500 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Pral4233g00015 500 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 425 498 - -
Pral4233g00015 500 Gene3D Phosphorylase Kinase; domain 1 303 400 - -
Pral4233g00015 500 Pfam Salt stress response/antifungal 145 240 IPR002902 -
Pral4233g00015 500 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Pral4233g00015 500 Gene3D - 30 130 IPR038408 -
Pral4233g00015 500 Gene3D - 137 243 IPR038408 -
Pral4233g00015 500 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Pral4233g00015 500 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Pral4233g00015 500 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Pral4233g00015 500 Pfam Protein tyrosine and serine/threonine kinase 329 416 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4233g00015 Pral-Chr4233 232416 239465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4233g00015 65 427 Receptor kinase-like Gene Family AT1G70530 34.324 2.21e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4233g00015 PK_Tyr_Ser-Thr 3.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4233g00015 - - pcin:129301902 589.726