Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4233g00014 ATGATCATCATCACTTTCATGTTCTGGTCGTCATGGTGGGCACTGAACGGCGTCGTTTCGGACCCGCAGACCAATCTTTTAAGAAAAGATTGCACTCCAGCTGGCATACTAGTGCTGCCCAACTTCTCCATCTTCAGTGACAACGTTAACGAAACGTTTGGAGAGATCAGAGAGCAGATTATGAGCATAAACAAGCACTTTGCGACGGCGCAGCAAGGTAATGGAGGAAACCCTGTTTTCAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTTGGCTGCTTCGACGCCGCCGCCAAACAAGTCCGCAATTGCCCTGCTGCTTCGCCCGGCGGCCTTGTCGTCTACGACGGCTGCTTCCTCGGGTACGAGACCACCGGTGCTTTCCTTGAACAAACAACGGAGGATTTCAATGCCGTATCGTGTAGTAGCCAGACTATGACAGGATCCACTTCGTTTACCTCACTTGCGCAGCAAATGCTAAAGAGTCTCCAAACAACAGCACCCAAGAACCAAGGGTTCTTTGCAGCCACAAGGATAGAATTGCCTGATAATAGTACAACTATTTATGCCTTTGTTCAATGTACTGAAACTATCACTCAGACTGGATGCGTCAATTGCTTGAACACTGGCTATAACAATATGCCGACTTGTCTTCCCAATTCGGAGGGTAGGGCTTATGCTTACGGGTGCTTTATGAGATACTCCACTACTTCCTTCTTTCCAGATAATTACCAGACAATTCATATTACTTCCGAGGGCAAACAAGGTTCAAATAAGAAGGGGACCATTATAGGTGTAGTTGTTGGAGTTGTAGCTTTTGTTTTGATCCTCCTTACACTATTAGCTTGGATTAAACGACCGAAAAGGCCTGAAAGATCAGTTCCTAGAGGCGACATATCCGGAGTAAGTAAGTTGAAAGGCCCAATTAATTTTAGCTATAGAGAGTTGAAGTTTGCAACTAAAAGTTTCAGTGCAGAAAATAAAGTTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACCCTGAAGAATGGGAAAGCAGTTGCTGTAAAGAAGTTAACCTTACACCAGTCTAAGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAACTTATAAGTAAAAACAGAGGTTCTCTTAATTGGAAGCAACGGTATGATATAATTTTAGGAACAACAAGGGGTATAACTTATCTACATGAAGAATTTCATGTTCGTATCATACATAGAGATATAAAGGCTAACAACATTCTCTTAGATAATGATCTCCAACCAAGAATTGCTGATTTTGGCTTAGCAAAGCTTTCACCTGAAGAAAAATCTCATCTTAGTACAAAATTTGCTGGAACATTAGGATACACTGCATCAGAATATGCAATTCATGGTCAATTATTAGAAAAAGCTGACATTTATAGCTTTGGCATTGTACTCCTAGAAATTATCAGCGGTGAACAAGGCAATGAATTGAATATTCATGATGATGTTGAAGGCGAATTTCTGCTTAAGAAAGCTTGGAAGCTATATGAGAGAGGCTTACACATGGAGTTGGTGGACAATACCATGGATCCAAATGATTATAATGTAGAAGAAGTGAAGAAAATTATAGAGATTGGTCTACTTTGCACTCAAGCATCTGCTGAATTAAGGCCATCAATATCTGAAGTAATTGTTTTGCTCCAAGGCAATGGCTTATTAGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACTTAA 1746 0.4124 MIIITFMFWSSWWALNGVVSDPQTNLLRKDCTPAGILVLPNFSIFSDNVNETFGEIREQIMSINKHFATAQQGNGGNPVFSLFQCRNYLSVHDCVGCFDAAAKQVRNCPAASPGGLVVYDGCFLGYETTGAFLEQTTEDFNAVSCSSQTMTGSTSFTSLAQQMLKSLQTTAPKNQGFFAATRIELPDNSTTIYAFVQCTETITQTGCVNCLNTGYNNMPTCLPNSEGRAYAYGCFMRYSTTSFFPDNYQTIHITSEGKQGSNKKGTIIGVVVGVVAFVLILLTLLAWIKRPKRPERSVPRGDISGVSKLKGPINFSYRELKFATKSFSAENKVGEGGFGAVYKGTLKNGKAVAVKKLTLHQSKKVEEEFESEVKLISKNRGSLNWKQRYDIILGTTRGITYLHEEFHVRIIHRDIKANNILLDNDLQPRIADFGLAKLSPEEKSHLSTKFAGTLGYTASEYAIHGQLLEKADIYSFGIVLLEIISGEQGNELNIHDDVEGEFLLKKAWKLYERGLHMELVDNTMDPNDYNVEEVKKIIEIGLLCTQASAELRPSISEVIVLLQGNGLLENMRPTMPILIET 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4233g00014 581 ProSiteProfiles Protein kinase domain profile. 327 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00014 581 Gene3D Phosphorylase Kinase; domain 1 303 377 - -
Pral4233g00014 581 Gene3D - 137 243 IPR038408 -
Pral4233g00014 581 Gene3D - 30 130 IPR038408 -
Pral4233g00014 581 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Pral4233g00014 581 Gene3D Transferase(Phosphotransferase) domain 1 378 570 - -
Pral4233g00014 581 ProSiteProfiles Gnk2-homologous domain profile. 25 131 IPR002902 -
Pral4233g00014 581 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 382 579 - -
Pral4233g00014 581 SUPERFAMILY Protein kinase-like (PK-like) 308 562 IPR011009 -
Pral4233g00014 581 FunFam Cysteine-rich receptor-like protein kinase 2 369 570 - -
Pral4233g00014 581 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Pral4233g00014 581 Pfam Salt stress response/antifungal 145 240 IPR002902 -
Pral4233g00014 581 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Pral4233g00014 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Pral4233g00014 581 Pfam Protein kinase domain 379 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4233g00014 581 SMART serkin_6 327 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4233g00014 Pral-Chr4233 232416 239465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4233g00014 6 563 Receptor kinase-like Gene Family AT1G70520 32.072 4.70e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4233g00014 Pkinase 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4233g00014 - - pcin:129300003 775.007