Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4231g00003 ATGGCTCCCACTGCTGGTCGCGTCATCAAGTGCAAAGCTGCGGTTGCTTGGGAAGCGGGGAAGCCGCTGGCGATTGAAGAGGTGGAGGTGGAGCCTCCGCGGGCTGGAGAAGTGCGTCTTAAAATCCTCTTTACCTCGCTTTGCCATAGTGATGTTTACTTCTGGGAAGCCAAGGGACAAATTCCGCTGTTCCCTCGCATACTGGGTCACGAAGCAGCAGGGATAGTGGAGAGCGTAGGCGAGGGGGTGACGAATCTGAAAGAGGGAGACCATGTTCTGCCGATATTCACCGGCGAGTGCGGAGAATGCCGGCACTGTAAGTCGGAGGAGAGCAACCTGTGCGACCTTCTGATGGTGGACTGCGACAGGGGTGTCATGCTCAACGGCCGCGACTGCAGGTTCTCTAAGAATGGGAAGCCCATCTATCACTTCCTGGGAACTTCCACTTTCAGCGAGTACACCATTGTCCATCATCAGTGTATTGCCAAGGTCAATCCCGCTGCCCCTCTCGACAAACTCTGCCTCCTCAGCTGCGGTTTCTGCACAGGTTTCGGTGCCACAGTCAACGTTGCAAAACCAAAACCTGGTTCTACTGTTGCCGTCTTTGGACTGGGAGCTGTTGGGCTTGCGGCTGCCGAAGGTGCAAGGGTTTCTGGTGCATCCAGAATCATTGGGGTTGACTTGCTGAATAGCCGTTTTGAGCCAGCCAAGAAATTTGGGGTGAATGAATTTGTGAACCCAAAGGATCATGACAGGCCTGTGCAAGAGGTGCTGGCTGAGATGACAGGTGGTGGTGTGGATTGTGCTCTTGAATGCTCCGGCAGCCTCCAAGCCATGATGTCCGCATTCGAATGCGTCCATCATGGTTGGGGTGTCGCTGTGCTGGTTGGTCTGCCAAGCAAGGATGATGCGTTCAAAACTCACCCAGTGAACTTCCTGAAGGAGAGAACTCTGAAGGGTACTTTCTATGGCAACTTCAAGCCCGTATCCGATATTCCTCTTCTTGCGGAGCGATACATGAAAGGGGTACGTAACTAA 1038 0.5376 MAPTAGRVIKCKAAVAWEAGKPLAIEEVEVEPPRAGEVRLKILFTSLCHSDVYFWEAKGQIPLFPRILGHEAAGIVESVGEGVTNLKEGDHVLPIFTGECGECRHCKSEESNLCDLLMVDCDRGVMLNGRDCRFSKNGKPIYHFLGTSTFSEYTIVHHQCIAKVNPAAPLDKLCLLSCGFCTGFGATVNVAKPKPGSTVAVFGLGAVGLAAAEGARVSGASRIIGVDLLNSRFEPAKKFGVNEFVNPKDHDRPVQEVLAEMTGGGVDCALECSGSLQAMMSAFECVHHGWGVAVLVGLPSKDDAFKTHPVNFLKERTLKGTFYGNFKPVSDIPLLAERYMKGVRN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4231g00003 345 Gene3D - 19 342 - -
Pral4231g00003 345 PANTHER ALCOHOL DEHYDROGENASE 7 341 - -
Pral4231g00003 345 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Pral4231g00003 345 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Pral4231g00003 345 Pfam Zinc-binding dehydrogenase 206 325 IPR013149 -
Pral4231g00003 345 Gene3D - 183 321 - -
Pral4231g00003 345 Pfam Alcohol dehydrogenase GroES-like domain 36 164 IPR013154 -
Pral4231g00003 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Pral4231g00003 345 SUPERFAMILY GroES-like 4 186 IPR011032 -
Pral4231g00003 345 FunFam Alcohol dehydrogenase class-P 183 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4231g00003 Pral-Chr4231 25735 30689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4231g00003 17 327 Monolignol Biosynthesis Gene Families AT1G72680 27.273 3.14e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4231g00003 K18857 - gmx:100783858 569.696