Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4229g00007 ATGCTGATTGAATGCATTTCACAATGTTTTTGCAGTAACTTGAGTGGCAACAAGCTTATAGGTTCAATTCCCAAGGCTCTTAAAGAAAATTCAGATCTGGCAATGAGTTTGGACGATAATCCTGACCTCTGTTTGAGGGATCCATGCAAGAAGAAAAAGCACAAATCCCCTATTCTATTAATTGTATCTGTTTCAGCTTTGACGGTTGTAATTCTGATTTCCCTAGGAATTTGGGTCTTCAAAATGAAAAAATCGGAAGTGGATTCTACTGTTTCAACAAATCAAGAAGTATCGGAGTATTTAAGAAATCGTGCTTTTTCCTACTCGGAGGTTCTTAAAATCACTAATAACTTCCAAAACTTGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTAGGCACTCTTAAGGATAACACTCAGGTTGCAGTGAAGTTACTTTCTCATTCATCAAGGCAAGGTCATAAAGAATTTCGATCAGAGGTAGAACTTTCGATTGTTGTTCATCATAAACACTTGGTTTCTCTGATTGGATACTGTGAAGAGAGTGGTGCTAGGGCATTAATTTACGAGTACATGGCTAATGGTGACCTCCAGCAACATTTAACGGAGAAAAATTCAAAAGTTTTAAGGTGGGCCGAGAGGCTTCAAGTTGCCATAGATGCAGCAAAAGGGCTGGAATATCTCCATATTGGTTGTAAAACTCCTATAATCCATAGAGACTTAAAACCGTCTAACATTTTATTAAATAAGCACATGGTAGCTAAGATTGCTGATTTTGGGTTATCTAGAGCATTTGAAAATGAAATGGATTCTCATCTATCAACTCGACCAGCTGGTACACCTGGTTTTATTGATCCTGAATTTCACAGGTCTGGAAACCTAAACCAGAAAAGTGATGTCTACAGTTTTGGAATGATTCTTCTTCAATTAATCACTGGCCACCCACCAATAAGAAGAGAACCTGAGGATATATGTTTTATTATTGATTGGATCCGTCCAAAAATTGAGTGTAGGGATATCCAAGGCATTGTTGATCTAAGGTTGGCTGGTGAATTCAATATTAGTTCTGCATGGAAAGCTGTGGAGACAGCAATGTCTTGCGTTGCGCCACAGTCTACTCAAAGGCCAGACATTAGTTCTGTGTTGCGTGAACTAAAGGAATGTTTGGCTATGGAGATTGGTCACACCAATTCAAATGGCATACCAAGCCATCAAATCAATCATTCTGGACAACTTGATCCAATCACTACCCTCTCAGCTAGGTAG 1266 0.3863 MLIECISQCFCSNLSGNKLIGSIPKALKENSDLAMSLDDNPDLCLRDPCKKKKHKSPILLIVSVSALTVVILISLGIWVFKMKKSEVDSTVSTNQEVSEYLRNRAFSYSEVLKITNNFQNLIGEGGFGKVYLGTLKDNTQVAVKLLSHSSRQGHKEFRSEVELSIVVHHKHLVSLIGYCEESGARALIYEYMANGDLQQHLTEKNSKVLRWAERLQVAIDAAKGLEYLHIGCKTPIIHRDLKPSNILLNKHMVAKIADFGLSRAFENEMDSHLSTRPAGTPGFIDPEFHRSGNLNQKSDVYSFGMILLQLITGHPPIRREPEDICFIIDWIRPKIECRDIQGIVDLRLAGEFNISSAWKAVETAMSCVAPQSTQRPDISSVLRELKECLAMEIGHTNSNGIPSHQINHSGQLDPITTLSAR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4229g00007 421 ProSiteProfiles Protein kinase domain profile. 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4229g00007 421 FunFam Lectin-domain containing receptor kinase A4.3 192 398 - -
Pral4229g00007 421 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Pral4229g00007 421 CDD STKc_IRAK 122 387 - -
Pral4229g00007 421 PANTHER OS07G0107800 PROTEIN-RELATED 13 389 - -
Pral4229g00007 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pral4229g00007 421 MobiDBLite consensus disorder prediction 400 421 - -
Pral4229g00007 421 SUPERFAMILY Protein kinase-like (PK-like) 92 385 IPR011009 -
Pral4229g00007 421 FunFam Leucine-rich repeat receptor-like protein kinase 88 191 - -
Pral4229g00007 421 Gene3D Phosphorylase Kinase; domain 1 87 191 - -
Pral4229g00007 421 Pfam Protein tyrosine and serine/threonine kinase 118 384 IPR001245 GO:0004672|GO:0006468
Pral4229g00007 421 SMART serkin_6 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4229g00007 421 Gene3D Transferase(Phosphotransferase) domain 1 192 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4229g00007 Pral-Chr4229 112416 120316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4229g00007 6 413 Receptor kinase-like Gene Family AT1G51850 44.860 1.55e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4229g00007 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4229g00007 - - pcin:129289942 535.413