Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4227g00033 ATGTCGGCCTCATCATCATCCACTTCTTCCTTTTCACCGGACCCCCATCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCCATTTCTGTGACACTGTTCTTGCGGTCAGTGTTCCTTGCACCAGCTTGTTCAAGACCGTCACTGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTGAATATGCGTGGCCTTCTTCTTCCTCCTGCCAATCAGCTTCATCTCGGACACTCCTTCTTGCCCCCTCAGAATCTTGTGGAGGAGATTCGAAATGCACCGTCTTCAAATTCAAATATGCAGATGATGAGCCATCATCATCAACTTCCACACCCAAATGACTCAGTTGTGAGCACCATGCGTGGAGGAGGAGGACTTGAGGAAACCCCTAAACCTCCCCCAGCTGCAAACAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGACGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCTCACATACACTTCGGACTCATGCCTGATCATCAACCCGTGAAGAAAGCCAATGTGCGCCAGGAAGGAGAAGAGGTGCTTATGAAAGAAGGATATTTGGGTCCCACAAACGTCGGTATATCTCCCTTTTAA 684 0.4971 MSASSSSTSSFSPDPHLSPSDQLCYVHCHFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPPANQLHLGHSFLPPQNLVEEIRNAPSSNSNMQMMSHHHQLPHPNDSVVSTMRGGGGLEETPKPPPAANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEEVLMKEGYLGPTNVGISPF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4227g00033 227 MobiDBLite consensus disorder prediction 119 146 - -
Pral4227g00033 227 CDD HMG-box_SF 145 181 - -
Pral4227g00033 227 SUPERFAMILY HMG-box 130 185 IPR036910 -
Pral4227g00033 227 Pfam YABBY protein 19 191 IPR006780 GO:0007275
Pral4227g00033 227 FunFam Axial regulator YABBY 136 208 - -
Pral4227g00033 227 Gene3D High mobility group box domain 129 188 IPR036910 -
Pral4227g00033 227 PANTHER PROTEIN YABBY 6-RELATED 5 203 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4227g00033 Pral-Chr4227 523617 528303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4227g00033 30 225 C2C2-YABBY Transcription Factor Family AT4G00180 63.158 2.31e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral4227g00033 YABBY 2.3e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4227g00033 K25796 - gmx:100781267 369.392