Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4227g00018 ATGGCTGGACAATCTGATCCTCACTTCTCTCTGTTTTCAGCTGAAGAGCTTGAATTTGTAGCTGAGGATGACATGGTTGAGATTGTACCCAATCTCAAAATGGATGCTCTCAACCTGATAAGTGGAGATTTTGGTCCATTTGCCCCACAAATAGCTACTCAAGTGCCGTTGTGGTTGGCTGTGGCTTTGAAGAGGAGAGGAAAATGCTCTATTCGCCCTCCTGAATGGATGTCAGTTGACGGCAAAGAGGGGAAGAGAGTGAAGAGGTCTACGAATAATTTAACTCAAGTTCTGGAGGCTGAGCGAGAATCTCAGGAAATGTCTGAAAAATTACCATTTCATTATGTAGAAATCTCAAGACTTCTCTTTGATCATGCACGCGATGACATTCCTGATGTATATATGGTGAGATCTCTAATTGAGGACATACGAGATGTAAGATTTCATAAAGTAAGGACCGACTTAGAGGCATTCAATGGTCGTACAATTGCTGTCAAGATTAAGAATTTGTCGGCAATGGAGGTGAATATTGTTCGCCCATTTATTAGAAGAGCTTTGCAGGCATTCTGTAAGCATGATAGTCCAGAGTTGATACCAGAACCAGAGAGAGTGGCTGACAAACGCCCACAATTAGTCAACAATGCTCCGAGAAGGCAACTACGACGATGA 669 0.4275 MAGQSDPHFSLFSAEELEFVAEDDMVEIVPNLKMDALNLISGDFGPFAPQIATQVPLWLAVALKRRGKCSIRPPEWMSVDGKEGKRVKRSTNNLTQVLEAERESQEMSEKLPFHYVEISRLLFDHARDDIPDVYMVRSLIEDIRDVRFHKVRTDLEAFNGRTIAVKIKNLSAMEVNIVRPFIRRALQAFCKHDSPELIPEPERVADKRPQLVNNAPRRQLRR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4227g00018 222 CDD GINS_A_psf2 66 194 - -
Pral4227g00018 222 FunFam DNA replication complex GINS protein PSF2 90 205 - -
Pral4227g00018 222 SUPERFAMILY GINS helical bundle-like 73 193 IPR036224 -
Pral4227g00018 222 Pfam GINS complex protein 53 174 IPR021151 -
Pral4227g00018 222 CDD GINS_B_Psf2 13 74 - -
Pral4227g00018 222 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 209 IPR007257 GO:0005634|GO:0006260
Pral4227g00018 222 Gene3D - 91 197 - -
Pral4227g00018 222 MobiDBLite consensus disorder prediction 203 222 - -
Pral4227g00018 222 SUPERFAMILY PriA/YqbF domain 12 71 - -
Pral4227g00018 222 PIRSF GINS_PSF2 2 222 IPR007257 GO:0005634|GO:0006260
Pral4227g00018 222 Gene3D - 12 77 - -
Pral4227g00018 222 FunFam DNA replication complex GINS protein PSF2 12 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4227g00018 Pral-Chr4227 184211 190534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4227g00018 1 159 Core DNA Replication Machinery Family AT3G12530 69.182 2.62e-78 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4227g00018 K10733 - gmx:100780528 354.755