Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4226g00007 ATGGATCAGGGCACTTTCTCTGCCCGAACCCGGAAAGCCAGACCCAAGTCTGAGCTGTATTCCACCGTCGTCGTGCACGACGATGACGACGACGACAACGGCGGCAACAGCTACGATAAGCGAGAGCAAAGCCGGAGCAGACAGAATGCCAGAAGCTCGGAACCCGAGGACGATCCATTTGCAACGATGGTCTACAGGGACAATGGCCCTGAAGACGAAGATGACGACGACCCCTCCCTCCCTCCTCTTCTCAAGCGCCTGCCAAAGGACTTCGGCGGTGGAGCTCCGTTGGACGACGAAGACGATCCTGACGACGATGCCGGCGATTTTGGCACCATGATCGTCAAGACTGATCGAGCTCGGGAGCGAAATCGGTCTTCTTCGTCGCCCATGGGTTCGACCTGGAAGTCTCGGAAGTCTCCTTTGACGCAGGCAGGTCCAATGGCGGGACTGGGTGATGAGAATGATGAAGATGATGACGGTGACGAGGGGTTTTCAACTTTTGTCGTACGTAAAACGGCTAGGTCCAGTGAGAGAGAGTCGGTCAGTGGAACCGTGGTGCGTAGGACAAGTGGCGGTGCTGGTGGTGGTGGAACTGCTACTAGCTCGACAATGGAAAGAGCGGTGGCGAGTATGCAGGCATCGGGTGAGCTGGGTTATGGGAAACAGAGGAGGGGAAGTGGGTCCTTGCAGAACGACGAGGGTAGGCAGTCAATAGGTACGAAGGTTTCATCGAGTTCGATTCCGGAAAGCGTCACCAGAGAGGATCCTACAACTAAGTACGAATTACTCAATGAACTTGGGAAGGGATCTTACGGGTCTGTTTACAAAGCTAGGGATTTAAAAACCTCCGAGCTTGTCGCTATCAAAGTCATTTCCCTCTCTGAAGGGGAGGAGGGATACGAAGAAATCCGAGGTGAAATTGAGATGTTGCAGCAATGTAATCATCCAAACGTGGTCCGCTACCTTGGAAGCTATCAGGGAGAAGAGTATCTTTGGATAGTTATGGAATACTGTGGCGGTGGTAGTGTTGCTGACCTGATGAATGTAACTGAGGAGCCACTGGATGAGGGTCAGATAGCGTACATCTGTAGAGAAGCATTGAAGGGACTTGAGTATTTGCACTCCATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACGAGGACCATGTCAAAGCGAAACACGTTCATTGGAACGCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGACGGAAAGGTAGACGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCAAGATCAGCTGTCCATCCAATGAGGGTTTTGTTCATGATATCCATTGAACCGGCACCAATGCTTGAGGATAAAGAAAAATGGTCTCTACATTTTCACGACTTTGTGGCTAAGTGCCTTACTAAGGAACCTCGTTTACGACCTACTGCATCAGAGATGTTAAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAACGGCAATGATGCCAAAAATTGAAAAGGCTAGGCAAATCAGGAAATCGATGGCTTTGCAAGCACAAACTGTTGCTCCGGCTGCATTAGAAGATCAGTGTAACGAGCAAAAACTGAATGATGACTATGGGGACACTGTTCCATCAAGACCTCTTAACGTTGGTGTTCAAGGGGCAGGTGGTCTTTCTTCAGATGGAACTCTGAGGACGCTGAATAGGTTGGAAAGTGTGGAAACGAGTGAAGGTAACTTTGGCACTGTAGTAGTCCATGGAGATGAGATTGATACAGCAGCAGTCAGGCCACAGGGAGCAGATAATGCAGATTCCTCTGCTTCCTCAATTAGTGGAACAAGAGGCAGATTGGCTGATTCTCG 1937 0.4951 MDQGTFSARTRKARPKSELYSTVVVHDDDDDDNGGNSYDKREQSRSRQNARSSEPEDDPFATMVYRDNGPEDEDDDDPSLPPLLKRLPKDFGGGAPLDDEDDPDDDAGDFGTMIVKTDRARERNRSSSSPMGSTWKSRKSPLTQAGPMAGLGDENDEDDDGDEGFSTFVVRKTARSSERESVSGTVVRRTSGGAGGGGTATSSTMERAVASMQASGELGYGKQRRGSGSLQNDEGRQSIGTKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLHFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSTAMMPKIEKARQIRKSMALQAQTVAPAALEDQCNEQKLNDDYGDTVPSRPLNVGVQGAGGLSSDGTLRTLNRLESVETSEGNFGTVVVHGDEIDTAAVRPQGADNADSSASSISGTRGRLADSRAESLKVAVSSDASVGGFGCSY 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4226g00007 667 MobiDBLite consensus disorder prediction 620 641 - -
Pral4226g00007 667 MobiDBLite consensus disorder prediction 7 54 - -
Pral4226g00007 667 MobiDBLite consensus disorder prediction 195 210 - -
Pral4226g00007 667 Gene3D Transferase(Phosphotransferase) domain 1 257 553 - -
Pral4226g00007 667 ProSiteProfiles Protein kinase domain profile. 261 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4226g00007 667 SUPERFAMILY Protein kinase-like (PK-like) 242 528 IPR011009 -
Pral4226g00007 667 MobiDBLite consensus disorder prediction 624 640 - -
Pral4226g00007 667 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 243 554 - -
Pral4226g00007 667 FunFam Aurora kinase A 253 342 - -
Pral4226g00007 667 Pfam Protein kinase domain 261 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4226g00007 667 MobiDBLite consensus disorder prediction 1 257 - -
Pral4226g00007 667 MobiDBLite consensus disorder prediction 126 141 - -
Pral4226g00007 667 SMART serkin_6 261 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4226g00007 667 MobiDBLite consensus disorder prediction 109 125 - -
Pral4226g00007 667 FunFam serine/threonine-protein kinase dst1 isoform X1 258 549 - -
Pral4226g00007 667 CDD STKc_MAP4K3_like 260 515 - -
Pral4226g00007 667 ProSitePatterns Protein kinases ATP-binding region signature. 267 290 IPR017441 GO:0005524
Pral4226g00007 667 MobiDBLite consensus disorder prediction 225 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4226g00007 Pral-Chr4226 53607 63288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4226g00007 7 638 MAP Kinase Kinase Kinase Kinase AT1G69220 58.733 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Pral4226g00007 Pkinase 6.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4226g00007 - - gmx:100804995 900.197