Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4226g00002 ATGGAAGCCATCAGAGTGATCTCCACAACCACAGTTCAAGCTCGAAGCCACGTTAATAATGGCGACTCACCAAAACTAATTGACATGAATCCATGGGATCTTCAGTATCTTGTTCTTGAGTATGCTCAAAAGGGGCTTCTTTATCACAAACCCACTTCATCATCCTCGTCGTTCCAACATTCAGAGACAGTGATCCAGCACTTGAAGGACTCGCTTTCTATGGCCCTCGACTTCTACCCACCCCTCGCCGGCCGTCTTGCCATCATCGACAACGACGACGATGACACCTCCTCCGTCTTCATCAATTGCAACAATGCCGGAGTAAGCTTTGTTCATGCTGTTGCAGAGAATACTACAATTGCTGATATTGTTGAACCTACTTATGTTCCACAAATTCTCTACTCCTTCTTCCCAACTGGAAAATTCAAGAACTTTGAAGGAACTCAGGTCCCATTAATGGCGGTTCAAGTCACAGAGCTAGTGGATGGCATCTTTGTCGCTTACTCGACCAACCATAGTCTTGTTGATGTGAAGCCAGCTTGA 543 0.4586 MEAIRVISTTTVQARSHVNNGDSPKLIDMNPWDLQYLVLEYAQKGLLYHKPTSSSSSFQHSETVIQHLKDSLSMALDFYPPLAGRLAIIDNDDDDTSSVFINCNNAGVSFVHAVAENTTIADIVEPTYVPQILYSFFPTGKFKNFEGTQVPLMAVQVTELVDGIFVAYSTNHSLVDVKPA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4226g00002 180 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 176 - -
Pral4226g00002 180 Gene3D - 2 179 IPR023213 -
Pral4226g00002 180 Pfam Transferase family 4 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4226g00002 Pral-Chr4226 16020 17630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4226g00002 48 122 Monolignol Biosynthesis Gene Families AT5G48930 37.333 9.61e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4226g00002 - - pcin:129323220 292.352