LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4223g00015	ATGGCAGCTAGCCAATACATTAACAATCTTCCTCCCAATTATCTTCCTTGTTTGGAACTCATTACCACCATAACCCTGTTATTCTTTCTCACATACCCTTCTGTTTCTTCACTTTCCTTCAACTATGAACAATTCAAGAACAGTGATCCAACATTGGAACCTAAAGGAGACGTTCACTGGGAAAATGGATGCCTGAACCTCACTAAGTTAGAGAAAGACAGCGTAGGGAGAGTCACCTACAGCGGAAATCTCCATCTTTGGGATGAGATGACAACAGGGGATGAGATGACAAGAAAAGTCACGGATTTTTCTTCCCATTTCTCCTTCATCATCAATACACAAGGCAAGACCACCAATCTTGGAGATGGCATAACCTTCTTCCTTGCCGCACCAGGCTTTCCCCTTCCGGATCCTAAAGATGGAGCCGGAATTGGCCTCGTGAGTCGTCTGCAATTGAAAGATCCAAATTACAGAAAGCAGCATCCTTTTGTGGCTGTGGAGTTTGACACCTTCCCAAATGTTGATTTGGATCCTCCTTATGATCATGTGGGGATTGATATTAATTCTCTGAACCCAAGTTATACTAAAAAGTGGTTCACTGTCAAGGATGGAAGAAAATACGATGCCATGATCAAGTACAATTCAAGTTCTTTCAATTTGAGTGTAAGTTTTATTGGGTATGAGAACGGCTCCAGAATTGAACAGAATTTCTGTCATATTGTCAATTTGGCTTATGTTCTTCCAGAGTGGGTTGAGTTTGGATTCTCTTCTGCAACAGGTTATTTACATGATGAGATCCATACTCTTTGCTCTTGGTCCTTCAGTTCAAGTTTAGACATCGTAGATCCGAACAATCAGAGCAAGATAGGACTTATAGAAGCATTGATCATAGGAGGAGGTGTTTTAATATGTGGAATGGGGTTATTTTGGTTTATAATTTGGAATACCAGAAGACGAAGAGGAGGAAGAATTGGTGCTTTTGGCTTTGAGCTAATAAGCATGGAAGATGAGTTTCAGAGAATGACAGGGCCGAATAAGTTTCCATATAATCAGCTTGTCAAAGCAACCGACAACTTTACACAAGAGAATAAGCTTGGAGAGGGAGGATTCGGTGGGGTTTACAAAGGGTTCATAGAAGAATTGAATAGCTATGCTGCTATTAAAAGGATATCACAAGGATCTAAGCAAGGGGTGAAGGAGTATGCGTCAGAGGTCAAGATCATCAGCCAACTGAGGCATAAGAATCTGGTTCGACTGATCGGTTGGTGCCATGAGCACAATGACTTAATGCTGCTTTACGAGTTCATGCAAAACGGAAGCTTAGATTCTCATCTCTTCAAAGGCAAAAGTCTCTTGACATGGGAACAAAGATATAACATAGCTCAAGGCCTGGCCTTAGCATTATATTACCTTCATGAAGAGTGTGAACAATGTGTGGTTCATAGGGACATAAAAGCAAGTAATGTTATGTTAGATCCAAAATTCAACGCAAAACTTGGAGATTTTGGGCTGGCTAGACTGGTGGACCATGCAAAAGGGTATAAAAGAACAGATCTAGCAGGAACCTTCGGATATATGGCTCCCGAGTACATCTCCAAAGGAAAGGCCAGTAGAGAGACTGATGTGTATGGTTTTGGAGTCGTCGCTTTGGAAATTGCTTGTGGGAGAAAAGCAATCCAATTTAGTGCCAATGAAGAACGGGTTTTACTTGTGGATTGGACTTGGGAACTCCATAGCAGAGAAAGTGTTCTTGAAGCAGCTGATCAGAGATTGTGTGGAGACTTCAACGAGCAAGAAATGCAGAGGTTGATGATGGTGGGATTATGGTGTGCTCATCCAGATCATATTCAAAGGCCTCCTATGAGACAAGTAGTTCAGGTGCTTAATTTTGAAGCTCCTTTACCTAATCTGCCATCCCAGAAGCCTGCACTTCCAAATGATTCTGTTGGAATCAGTGACTTTATATCTTCAAACTCTTCGTCAAGTACTAGTGCTTCGAGGATCAATCGTACCTTCCCTTTAAGTGATGGCTTTTTCACTGGCTCATCACAATCAAGCATTTCTCCAGCAGACCCCATTCTGCATACATACTAA	2094	0.4174	MAASQYINNLPPNYLPCLELITTITLLFFLTYPSVSSLSFNYEQFKNSDPTLEPKGDVHWENGCLNLTKLEKDSVGRVTYSGNLHLWDEMTTGDEMTRKVTDFSSHFSFIINTQGKTTNLGDGITFFLAAPGFPLPDPKDGAGIGLVSRLQLKDPNYRKQHPFVAVEFDTFPNVDLDPPYDHVGIDINSLNPSYTKKWFTVKDGRKYDAMIKYNSSSFNLSVSFIGYENGSRIEQNFCHIVNLAYVLPEWVEFGFSSATGYLHDEIHTLCSWSFSSSLDIVDPNNQSKIGLIEALIIGGGVLICGMGLFWFIIWNTRRRRGGRIGAFGFELISMEDEFQRMTGPNKFPYNQLVKATDNFTQENKLGEGGFGGVYKGFIEELNSYAAIKRISQGSKQGVKEYASEVKIISQLRHKNLVRLIGWCHEHNDLMLLYEFMQNGSLDSHLFKGKSLLTWEQRYNIAQGLALALYYLHEECEQCVVHRDIKASNVMLDPKFNAKLGDFGLARLVDHAKGYKRTDLAGTFGYMAPEYISKGKASRETDVYGFGVVALEIACGRKAIQFSANEERVLLVDWTWELHSRESVLEAADQRLCGDFNEQEMQRLMMVGLWCAHPDHIQRPPMRQVVQVLNFEAPLPNLPSQKPALPNDSVGISDFISSNSSSSTSASRINRTFPLSDGFFTGSSQSSISPADPILHTY	697

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4223g00015	697	Gene3D	Transferase(Phosphotransferase) domain 1	436	647	-	-
	Pral4223g00015	697	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	479	491	IPR008271	GO:0004672\|GO:0006468
	Pral4223g00015	697	Pfam	Protein kinase domain	359	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4223g00015	697	ProSitePatterns	Protein kinases ATP-binding region signature.	365	388	IPR017441	GO:0005524
	Pral4223g00015	697	ProSitePatterns	Legume lectins beta-chain signature.	164	170	IPR019825	-
	Pral4223g00015	697	Gene3D	-	35	296	-	-
	Pral4223g00015	697	Gene3D	Phosphorylase Kinase; domain 1	344	435	-	-
	Pral4223g00015	697	CDD	STKc_IRAK	365	629	-	-
	Pral4223g00015	697	SMART	serkin_6	359	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4223g00015	697	CDD	lectin_legume_LecRK_Arcelin_ConA	38	278	IPR001220	GO:0030246
	Pral4223g00015	697	Pfam	Legume lectin domain	37	288	IPR001220	GO:0030246
	Pral4223g00015	697	FunFam	L-type lectin-domain containing receptor kinase IX.1	344	435	-	-
	Pral4223g00015	697	SUPERFAMILY	Protein kinase-like (PK-like)	336	630	IPR011009	-
	Pral4223g00015	697	ProSitePatterns	Legume lectins alpha-chain signature.	247	256	IPR000985	-
	Pral4223g00015	697	PANTHER	-	62	635	-	-
	Pral4223g00015	697	ProSiteProfiles	Protein kinase domain profile.	359	637	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4223g00015	697	SUPERFAMILY	Concanavalin A-like lectins/glucanases	36	282	IPR013320	-
	Pral4223g00015	697	FunFam	Lectin-domain containing receptor kinase A4.3	436	646	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4223g00015	Pral-Chr4223	110703	112877	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4223g00015	28	643	Receptor kinase-like Gene Family	AT5G10530	44.921	2.06e-164	486

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral4223g00015		Pkinase	3.3e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4223g00015	-		-	cam:101491058	704.131