Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4223g00005 ATGACGATGAAGATGCTATCTTTAATAATTTTCTTCCTCTTGATCATCCCTCAAGCATTTTCCATATCCTTCAGCTTCTCTAGTTTCAGCCCAAATGATAGAAACATATCGTACGAGGGATCATCTTACCCGGCACCACCATCCATCCAGTTAACAAGAAACCAACAAGACCAATCCTCGACGGCTAGTGTTGGTCGAGCCACATATTACCGACCAATGCGTTTATGGGACAAAGCCACTGGGAACCTCACAGACTTCAGAACCCATTTCACTTTTGTGATTCGTTCAAAGCAGAAAGTATATGGAGATGGGTTGGCTTTCTTCTTAGCCCCTGCTGGTTCAAAGCTTCCCAATGTCACAAAAGGAGGTTCTATGGGTCTGACTCTTGATGACCAGCCATTAAATTCAACAAACAATCCTTTTGTTGCTGTGGAGTTTGATATCTATAAGAATTATTGGGATCCTCCGAAGGAACATGTAGGCGTCAATGTCAATTCCATGAGATCTGTTAATAACTTGACATGGTTGGCTGATATCAATGGAGGGAGAACTAATGAGGTTTTCATCAGTTACAGCTCAAATACACAAAATCTAAGCATTGTCTTCACTGGCTTTGTTAATGGTACTATTGTGCAGCAACATCTTTATCAAATAGTCGATATGAGAAAGTATCTACCTGAATGGGTTACTTTTGGCTTCTCAGCTGCCACCGGAAGTACTTCAGCAATACATAAGATCAACTCATGGAGTTTCTTATCGAATAATGATGATTTGAATACTCCAAATGAGTTCTCAGAAACACCTTTTAACCCAAGCACGAGCCCAAGCCCGAGCCAGAGCCCGAAGAGTAGAAATAACAGGACAAAACTCGGAGTTGGATTAGGGGTTGGAGGGTTTATTTTAATTTGTGTGTTTAGTTTGGTTTTTGTAGGCTTGAAGAAGAAGAAAAGGAAGATGGAAGAGGATGATCATGAGTTTGATGAGCAAATGCATGACAGCTTTGGAAGAGGAATAGGACCAAAGGAGTACTCATATGCTGATCTAGCAAGTGCTACAAATTATTTTGAAGATGCACAGAAATTAGGACAAGGAGGGTTTGGGGAGGTTTATAGAGGTTTTCTCAAAGATTCAAACACCTACATAGCCATAAAGAGAATATCAGAGAGTTCTAAACAAGGAATGAAGGAGTTTGCTTCGGAAGTAAGAATTATTAGTCAACTACGGCATCGAAATTTGGTACAACTACTTGGGTGGTGTCACAAAGGGAAAGAACTATTGTTGGTTTATGAGTATATGCCAAATGGAAGTTTAGATTTTCATCTCTTCAAGGATCAAAATTTGCTAAAATGGTCGGAAAGATTCAACATAGCTCAAGGCTTGGCCTCTGCATTGTTATACCTGCATGAAGGATGGGAACGATGTGTTGTTCATAGAGACATAAAGTCAAGCAATATCATGCTAGATTCTAACTTTAATGCAAAACTTGGAGATTTTGGGTTAGCAAGACTCGTAGACCACGCAAAAAGTTCACCAACCACAGCTTTGGCAGGAACTATGGGCTATATGGCTCCTGAATGTCTTTTTATTGGGAGGGCAAGCAAAGAATATGATATGTTTAGTTTTGGAATTGTTGCTTTGGAACTAGCTTGTGGAAGAAAATGCATAAACCACAATGCTCCAGAAAATGAAATAAACATAGTGAATTGGGTATGGGAACTATATGGAAGTGGGAGAATTCTTGAAGCAGTCGATTCAAGACTCCAAGGAGATTTTGACCATGATCAAATCAAATGTTTGATGATTGTTGGGCTATGGTGTGCTCATCCTGATCATAAGCATAGGCCTTCCATAAGGCAAGCGATGAATGTGCTTAACTTTGAAGTTCCATTTCCTAGTCTTCCATTAAGCTATCCAGAACTCACATATCATGAACTTCCTCCAGTGGGATCATCATCTTCAATTCCATCCACCACCAATGCTTCAGAGGTTAGTCAAAACCAGAACTTAACATTTAGTTCCAACACAAACTCCTCTGGTTTCACTGCAACTTCACTCTGA 2058 0.3999 MTMKMLSLIIFFLLIIPQAFSISFSFSSFSPNDRNISYEGSSYPAPPSIQLTRNQQDQSSTASVGRATYYRPMRLWDKATGNLTDFRTHFTFVIRSKQKVYGDGLAFFLAPAGSKLPNVTKGGSMGLTLDDQPLNSTNNPFVAVEFDIYKNYWDPPKEHVGVNVNSMRSVNNLTWLADINGGRTNEVFISYSSNTQNLSIVFTGFVNGTIVQQHLYQIVDMRKYLPEWVTFGFSAATGSTSAIHKINSWSFLSNNDDLNTPNEFSETPFNPSTSPSPSQSPKSRNNRTKLGVGLGVGGFILICVFSLVFVGLKKKKRKMEEDDHEFDEQMHDSFGRGIGPKEYSYADLASATNYFEDAQKLGQGGFGEVYRGFLKDSNTYIAIKRISESSKQGMKEFASEVRIISQLRHRNLVQLLGWCHKGKELLLVYEYMPNGSLDFHLFKDQNLLKWSERFNIAQGLASALLYLHEGWERCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKSSPTTALAGTMGYMAPECLFIGRASKEYDMFSFGIVALELACGRKCINHNAPENEINIVNWVWELYGSGRILEAVDSRLQGDFDHDQIKCLMIVGLWCAHPDHKHRPSIRQAMNVLNFEVPFPSLPLSYPELTYHELPPVGSSSSIPSTTNASEVSQNQNLTFSSNTNSSGFTATSL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4223g00005 685 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4223g00005 685 MobiDBLite consensus disorder prediction 651 685 - -
Pral4223g00005 685 FunFam L-type lectin-domain containing receptor kinase IX.1 340 431 - -
Pral4223g00005 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 254 IPR013320 -
Pral4223g00005 685 CDD lectin_legume_LecRK_Arcelin_ConA 31 254 IPR001220 GO:0030246
Pral4223g00005 685 FunFam Lectin-domain containing receptor kinase A4.3 432 644 - -
Pral4223g00005 685 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Pral4223g00005 685 Pfam Legume lectin domain 22 257 IPR001220 GO:0030246
Pral4223g00005 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pral4223g00005 685 CDD STKc_IRAK 361 625 - -
Pral4223g00005 685 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4223g00005 685 SMART serkin_6 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4223g00005 685 MobiDBLite consensus disorder prediction 260 286 - -
Pral4223g00005 685 Gene3D Transferase(Phosphotransferase) domain 1 432 641 - -
Pral4223g00005 685 SUPERFAMILY Protein kinase-like (PK-like) 337 626 IPR011009 -
Pral4223g00005 685 PANTHER - 51 628 - -
Pral4223g00005 685 Gene3D - 20 263 - -
Pral4223g00005 685 ProSitePatterns Legume lectins alpha-chain signature. 225 234 IPR000985 -
Pral4223g00005 685 FunFam L-type lectin-domain containing receptor kinase IX.1 20 263 - -
Pral4223g00005 685 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4223g00005 Pral-Chr4223 51230 53609 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4223g00005 7 643 Receptor kinase-like Gene Family AT5G10530 45.413 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4223g00005 Pkinase 3.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4223g00005 - - gmx:100817743 853.973