Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4219g00034 ATGGGGGAGATCATGGTGAGACTGCCTGTAAAATCCTTGCTTCGGTTCAAATGTGTAGCCAAATCCTGGTATGCCCTCATCACTGACCCTTCTTTTATTGCCAAACATCTTGAACGGTCCAAATCTATCACCAATGGCCGCAGCCGTAAGCTTATCTTCTATGGCTACCGTGTGGATAGGCCACCCTACATAACCCTAATTTCTAAAGACCAACCTTATTGTGTGCCCCAGTATTTAGAGCCTCTCCCCAGGCTATATTGTACATTCTATGGTCAATGCAATGGAATTTTTTGTCTCCATGTCTTGGACCCCACCGATGTCAATGAAAACGTAGATCACGATGATGGGGATGAGGGTAACTTAATTCTTTGGAACCCAACCACAAAAGAGGATAAGCTTATTCCGCTACCCCAATGTCAACCCAAAGCCATATTTTCTAACATGTTTGGATTTGGGTTTGATCCCATTACAAAGGATTACAAGGTTGTTCAAGTTTCCCATCCTCCTTTGGAGGGAGGAGTACGTCTGGTTGAAGTATATAATCTCAGTACTAATTCTTGGAGGATGCTAGATGTTGTTGTCCCAGCAGCTTTTGATTTCTATGTCGAAGATTGTAAGACTTATTTGAATGGTGTTTATCACTGGTATATTTATGACCCGTCTGGAATCAGAAAGAACTTTATTCTGAGCTTTGACTTTACCAGAGAGGTGTTTGGGACGATCCAATTGCCCTCTGCTACTGATTCTTATTACTGTGGACACAATGTTTTTGTGCTTGATGAGAGTCTTGCTATTCTTCAACATGACTGGGAGACTCGGAAATCTAAGATTTGGGTGATGAAAGAGTATGGTGTTGAGAGTAGTTGGACTAACAAATTTGACGTTGAACGCTTCCAAAGTTTGCCTCCATCTTAA 915 0.4197 MGEIMVRLPVKSLLRFKCVAKSWYALITDPSFIAKHLERSKSITNGRSRKLIFYGYRVDRPPYITLISKDQPYCVPQYLEPLPRLYCTFYGQCNGIFCLHVLDPTDVNENVDHDDGDEGNLILWNPTTKEDKLIPLPQCQPKAIFSNMFGFGFDPITKDYKVVQVSHPPLEGGVRLVEVYNLSTNSWRMLDVVVPAAFDFYVEDCKTYLNGVYHWYIYDPSGIRKNFILSFDFTREVFGTIQLPSATDSYYCGHNVFVLDESLAILQHDWETRKSKIWVMKEYGVESSWTNKFDVERFQSLPPS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4219g00034 304 PANTHER OS09G0372900 PROTEIN-RELATED 4 284 - -
Pral4219g00034 304 Pfam F-box associated 208 296 IPR006527 -
Pral4219g00034 304 NCBIfam F-box protein interaction domain 92 296 IPR017451 -
Pral4219g00034 304 Gene3D - 1 32 - -
Pral4219g00034 304 SUPERFAMILY F-box domain 3 42 IPR036047 GO:0005515
Pral4219g00034 304 CDD F-box_AtFBW1-like 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4219g00034 Pral-Chr4219 184319 185233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4219g00034 178 284 Carbohydrate Esterase AT1G25141 26.852 2.93e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4219g00034 - - pcin:129320976 235.728