Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4219g00012 ATGGAGATTTTTAAATGTTTTCACTTCAGTCTCCTTCTTGCTACTTTTTCCGTTTTCTTCTTGGCAGTTTCAGCAATGGACCCTTATTCTGATGCACTCCTGAGCCTGAAATCTGAACTCGTGGAAGATGAAGACAGTTTACGTGACTGGGTGGTGGTGCCTTCGGGAGGAAACTCAACTGGGAAATCCAATGCTTGTTGTTCTTGGTCTGGAATCATGTGTGATAAAGACTCAAAAATTGTAACCTCCATAGACTTGTCCATGAAGAAACTGGGAGGTGTAATGTCAGGAAAGCAATTCAGTATCTTCACAAAGCTTGAATATCTCAACCTCAGCTACAATTTCTTCTCTGGGCAACTTCCTGTGGAAATTTTCAACCTCACCAGTCTAAGAAGCTTGGACATAAGCAGAAACAACTTTTCTGGTCACTTCCCAGGTGGGATTTCCAGCCTTAAAAATTTGCTTGTACTTGATGCCTTTAGCAACAGCTTTTCCGGGCCATTGCCTGCTGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGCTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTATTCATCTTGCAGGTAATCTCCTCTCTGGGAAGCTACCTCCAGAACTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTCCATTCCGTCTGAGTTAGGTAACATGAGTGAACTCAGGTATCTTGACATTGCTGGTGCAAATCTATCTGGCCCAATACCAGAGCACCTCTCCAATCTCACAAATTTGCAGTCACTTTATCTGTTCAGAAACCAGCTCACGGGATCAATTCCAAGTGAGTTTAGCAAGATCAAGTCACTCACAGATTTAGATCTTTCTGACAATCTCATCTCTGGGCCCATTCCTGAAAGCTTCTCAGAGTTGGAGAACATGAGGCTGCTAAGCCTCATGTACAACGACATGAATGGCACTGTTCCTGAAGGCATAGCACAACTTCCAAACTTAGAAACTCTTCTCATTTGGAACAACTACTTCTCTGGATCACTTCCACAGAGCTTGGGGAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAATAATTTTATAGGCAGTATACCACCAGACATTTGTAGGAGAGGAGTACTATATAAGCTGATTTTGTTTTCAAACAGATTCTCGGGCAGCCTCTCACCATCTCTCTCAAATTGTTCTTCACTTGTTCGTCTTCGCTTGGAAGATAACCTGTTCACAGGGAATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACCTATCCAGGAATAAATTTCTTGGTGGGATCCCCTCAGATATTTCCCAAGCTATCAAGCTTACTTATTTCAATGTCTCCAATAATCCACTATTAGGAGGCACCATCCCTGCAAAAACATGGTCTTTGCCACTTCTGCAAAACTTTTCAGCCTCCTCCTGTGGCATTTTAGGAAATCTTCCTCCATTTGAGTCTTGCAGATCAGTCTCTAGCATTGAGCTGGATAGGAACAACTTGTTTGGGACGATCTCATTTGCCGTTTCAAATTGCAAAAATCTTGAGAATATAAAATTATCCAACAATAATTTATCCGGTCCTATACCTGAGCAGCTTGCAAGCATCCCTGTTCTTGGTGTTGTAGACCTATCACACAATAACTTCAATGGTCCTATACCTGCAAAGTTTAGCACTTGTTCGAGCTTACAACTTCTTAACGTGTCTTTCAACGACATCTCTGGTTCAATTCCCAAAGGAGAGTTATTCAGATTCATGGATAACAGTGCATTTATTGGGAATCCAGAGCTATGTGGAGCACCTCTACGACCGTGTTCTGATTCAGTTGGAATATTTGGAAGTAAAGGCACATGGAAGCTTACAAGTGTAGTGCTATTGTGTGCAGGATTGCTTATATTCCTTGTCGCAGCCTTAGCTTTTGGAATTGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATTTCATTTGTTGGGCTCCCTCAATTCACAGCAAAAGATGTCTTGACAAGCTTCAACACCACGGAGTCAAGAGGCGTGGCAGCAACACCATCACCATCAGTTTCAAAAGCTGTTCTGCCAACGGGAATACCAGTTTTAGTGAAGAAGATCGGATGGGAAAAGAGGAACATAAAAGCAGTGTCAGAGTTTATAGCGCGACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGCTACAACCAGAATCTAGCTTATATTTTATATGACTACTTACCCAATGGGAACCTGGCAGAGAAAATTGGGATGAAAAGGGATTGGGCAGCAAAATTCAGAATTGTGATTGGCATTGCTAAGGGACTTTGCTTTCTTCATCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAGTCTAGCAATGTAGTATTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAGCATGTGTTGAATTTGAGCAAAGGTTCATCTCCTGCCACAACTTCCAGCTGGGAACCAGGGATTCATGAGAAAATTTCACACAACCATGAAAGACATGAAACTTTGCTTTAA 2628 0.4186 MEIFKCFHFSLLLATFSVFFLAVSAMDPYSDALLSLKSELVEDEDSLRDWVVVPSGGNSTGKSNACCSWSGIMCDKDSKIVTSIDLSMKKLGGVMSGKQFSIFTKLEYLNLSYNFFSGQLPVEIFNLTSLRSLDISRNNFSGHFPGGISSLKNLLVLDAFSNSFSGPLPAELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFIHLAGNLLSGKLPPELGNLKTVTHMEIGYNSYQGSIPSELGNMSELRYLDIAGANLSGPIPEHLSNLTNLQSLYLFRNQLTGSIPSEFSKIKSLTDLDLSDNLISGPIPESFSELENMRLLSLMYNDMNGTVPEGIAQLPNLETLLIWNNYFSGSLPQSLGKNSNLMWVDVSTNNFIGSIPPDICRRGVLYKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNKFLGGIPSDISQAIKLTYFNVSNNPLLGGTIPAKTWSLPLLQNFSASSCGILGNLPPFESCRSVSSIELDRNNLFGTISFAVSNCKNLENIKLSNNNLSGPIPEQLASIPVLGVVDLSHNNFNGPIPAKFSTCSSLQLLNVSFNDISGSIPKGELFRFMDNSAFIGNPELCGAPLRPCSDSVGIFGSKGTWKLTSVVLLCAGLLIFLVAALAFGIVYFRRGVKSQWKMISFVGLPQFTAKDVLTSFNTTESRGVAATPSPSVSKAVLPTGIPVLVKKIGWEKRNIKAVSEFIARLGNARHKNLIRLLGFCYNQNLAYILYDYLPNGNLAEKIGMKRDWAAKFRIVIGIAKGLCFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGLKHVLNLSKGSSPATTSSWEPGIHEKISHNHERHETLL 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4219g00012 875 PANTHER UNNAMED PRODUCT 104 194 - -
Pral4219g00012 875 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
Pral4219g00012 875 Gene3D Ribonuclease Inhibitor 193 287 IPR032675 -
Pral4219g00012 875 Gene3D Ribonuclease Inhibitor 393 632 IPR032675 -
Pral4219g00012 875 SUPERFAMILY L domain-like 312 628 - -
Pral4219g00012 875 ProSiteProfiles Protein kinase domain profile. 652 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4219g00012 875 SMART LRR_typ_2 271 294 IPR003591 -
Pral4219g00012 875 SMART LRR_typ_2 127 151 IPR003591 -
Pral4219g00012 875 SMART LRR_typ_2 343 367 IPR003591 -
Pral4219g00012 875 SMART LRR_typ_2 199 223 IPR003591 -
Pral4219g00012 875 Gene3D Transferase(Phosphotransferase) domain 1 699 862 - -
Pral4219g00012 875 FunFam Leucine-rich repeat receptor-like protein kinase TDR 687 772 - -
Pral4219g00012 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Pral4219g00012 875 Pfam Leucine Rich Repeat 105 121 IPR001611 GO:0005515
Pral4219g00012 875 FunFam Leucine-rich repeat receptor-like protein kinase 26 193 - -
Pral4219g00012 875 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Pral4219g00012 875 Pfam Protein kinase domain 718 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4219g00012 875 SUPERFAMILY L domain-like 64 404 - -
Pral4219g00012 875 FunFam Leucine-rich repeat receptor-like protein kinase TDR 194 297 - -
Pral4219g00012 875 FunFam Leucine-rich repeat receptor-like protein kinase TDR 316 630 - -
Pral4219g00012 875 Gene3D Ribonuclease Inhibitor 288 392 IPR032675 -
Pral4219g00012 875 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Pral4219g00012 875 SUPERFAMILY Protein kinase-like (PK-like) 711 847 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4219g00012 Pral-Chr4219 58943 62020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4219g00012 18 844 Receptor kinase-like Gene Family AT5G51350 56.905 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4219g00012 Pkinase 9.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4219g00012 - - aprc:113852384 1274.23