Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4219g00010 ATGGAGATTTTTAAATGTTTTCACTTCAGTCTCCTTCTTGCTACTTTTTCCGTTTTCTTCTTGGCAGTTTCAGCAATGGACCCTTATTCTGATGCACTCCTGAGCCTGAAATCTGAACTCGTGGAAGATGAAGACAGTTTACGTGACTGGGTGGTGGTGCCTTCGGGAGGAAACTCAACTGGGAAATCCAATGCTTGTTGTTCTTGGTCTGGAATCATGTGTGATAAAGACTCAAAAATTGTAACCTCCATAGACTTGTCCATGAAGAAACTGGGAGGTGTAATGTCAGGAAAGCAATTCAGTATCTTCACAAAGCTTGAATATCTCAACCTCAGCTACAATTTCTTCTCTGGGCAACTTCCTGTGGAAATTTTCAACCTCACCAGTCTAAGAAGCTTGGACATAAGCAGAAACAACTTTTCTGGTCACTTCCCAGGTGGGATTTCCAGCCTTAAAAATTTGCTTGTACTTGATGCCTTTAGCAACAGCTTTTCCGGGCCATTGCCTGCTGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGCTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTATTCATCTTGCAGGTAATCTCCTCTCTGGGAAGCTACCTCCAGAACTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTCCATTCCGTCTGAGTTAGGTAACATGAGTGAACTCAGGTATCTTGACATTGCTGGTGCAAATCTATCTGGCCCAATACCAGAGCACCTCTCCAATCTCACAAATTTGCAGTCACTTTATCTGTTCAGAAACCAGCTCACGGGATCAATTCCAAGTGAGTTTAGCAAGATCAAGTCACTCACAGATTTAGATCTTTCTGACAATCTCATCTCTGGGCCCATTCCTGAAAGCTTCTCAGAGTTGGAGAACATGAGGCTGCTAAGCCTCATGTACAACGACATGAATGGCACTGTTCCTGAAGGCATAGCACAACTTCCAAACTTAGAAACTCTTCTCATTTGGAACAACTACTTCTCTGGATCACTTCCACAGAGCTTGGGGAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAATAATTTTATAGGCAGTATACCACCAGACATTTGTAGGAGAGGAGTACTATATAAGCTGATTTTGTTTTCAAACAGATTCTCGGGCAGCCTCTCACCATCTCTCTCAAATTGTTCTTCACTTGTTCGTCTTCGCTTGGAAGATAACCTGTTCACAGGGAATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACCTATCCAGGAATAAATTTCTTGGTGGGATCCCCTCAGATATTTCCCAAGCTATCAAGCTTACTTATTTCAATGTCTCCAATAATCCACTATTAGGAGGCACCATCCCTGCAAAAACATGGTCTTTGCCACTTCTGCAAAACTTTTCAGCCTCCTCCTGTGGCATTTTAGGAAATCTTCCTCCATTTGAGTCTTGCAGATCAGTCTCTAGCATTGAGCTGGATAGGAACAACTTGTTTGGGACGATCTCATTTGCCGTTTCAAATTGCAAAAATCTTGAGAATATAAAATTATCCAACAATAATTTATCCGGTCCTATACCTGAGCAGCTTGCAAGCATCCCTGTTCTTGGTGTTGTAGACCTATCACACAATAACTTCAATGGTCCTATACCTGCAAAGTTTAGCACTTGTTCGAGCTTACAACTTCTTAACGTGTCTTTCAACGACATCTCTGGTTCAATTCCCAAAGGAGAGTTATTCAGATTCATGGATAACAGTGCATTTATTGGGAATCCAGAGCTATGTGGAGCACCTCTACGACCGTGTTCTGATTCAGTTGGAATATTTGGAAGTAAAGGCACATGGAAGCTTACAAGTGTAGTGCTATTGTGTGCAGGATTGCTTATATTCCTTGTCGCAGCCTTAGCTTTTGGAATTGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATTTCATTTGTTGGGCTCCCTCAATTCACAGCAAAAGATGTCTTGACAAGCTTCAACACCACGGAGTCAAGAGGCGTGGCAGCAACACCATCACCATCAGTTTCAAAAGCTGTTCTGCCAACGGGAATACCAGTTTTAGTGAAGAAGATCGGATGGGAAAAGAGGAACATAAAAGCAGTGTCAGAGTTTATAGCGCGACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGCTACAACCAGAATCTAGCTTATATTTTATATGACTACTTACCCAATGGGAACCTGGCAGAGAAAATTGGGATGAAAAGGGATTGGGCAGCAAAATTCAGAATTGTGATTGGCATTGCTAAGGGACTTTGCTTTCTTCATCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAGTCTAGCAATGTAGTATTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAGCATGTGTTGAATTTGAGCAAAGGTTCATCTCCTGCCACAACTTCCAGCTGGGAACCAGCAGAATCTAATGAAGCCATGAAAGAGGAATTCTACGCCGATGTCAACAAATTTGGTGAGATGATTGTGGAGATTTTAACCAATGGAAGGCTGACAAATGCAGCAGCTAGCATACACAGCAAACCAAGAGAGGTTCTTTTGAGAGAAATTTGCGATGAAAATGATGTGAGTTCTGCCAGTTCACTGCAAGAGATAAAAATGGTTCTTGAAGTGGCTTTGCTTTGCACCAGAAGCAAGTCAACAGATCGCCCATCCATGGGAGATGCCTTGAAGCTTTTGTCAGGGTCAATGCCTCCGGAGGATCACAAATATTAA 2889 0.4213 MEIFKCFHFSLLLATFSVFFLAVSAMDPYSDALLSLKSELVEDEDSLRDWVVVPSGGNSTGKSNACCSWSGIMCDKDSKIVTSIDLSMKKLGGVMSGKQFSIFTKLEYLNLSYNFFSGQLPVEIFNLTSLRSLDISRNNFSGHFPGGISSLKNLLVLDAFSNSFSGPLPAELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFIHLAGNLLSGKLPPELGNLKTVTHMEIGYNSYQGSIPSELGNMSELRYLDIAGANLSGPIPEHLSNLTNLQSLYLFRNQLTGSIPSEFSKIKSLTDLDLSDNLISGPIPESFSELENMRLLSLMYNDMNGTVPEGIAQLPNLETLLIWNNYFSGSLPQSLGKNSNLMWVDVSTNNFIGSIPPDICRRGVLYKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNKFLGGIPSDISQAIKLTYFNVSNNPLLGGTIPAKTWSLPLLQNFSASSCGILGNLPPFESCRSVSSIELDRNNLFGTISFAVSNCKNLENIKLSNNNLSGPIPEQLASIPVLGVVDLSHNNFNGPIPAKFSTCSSLQLLNVSFNDISGSIPKGELFRFMDNSAFIGNPELCGAPLRPCSDSVGIFGSKGTWKLTSVVLLCAGLLIFLVAALAFGIVYFRRGVKSQWKMISFVGLPQFTAKDVLTSFNTTESRGVAATPSPSVSKAVLPTGIPVLVKKIGWEKRNIKAVSEFIARLGNARHKNLIRLLGFCYNQNLAYILYDYLPNGNLAEKIGMKRDWAAKFRIVIGIAKGLCFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGLKHVLNLSKGSSPATTSSWEPAESNEAMKEEFYADVNKFGEMIVEILTNGRLTNAAASIHSKPREVLLREICDENDVSSASSLQEIKMVLEVALLCTRSKSTDRPSMGDALKLLSGSMPPEDHKY 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4219g00010 962 SUPERFAMILY RNI-like 83 405 - -
Pral4219g00010 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 194 297 - -
Pral4219g00010 962 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Pral4219g00010 962 ProSiteProfiles Protein kinase domain profile. 652 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4219g00010 962 MobiDBLite consensus disorder prediction 938 962 - -
Pral4219g00010 962 FunFam Leucine-rich repeat receptor-like protein kinase 26 193 - -
Pral4219g00010 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 687 772 - -
Pral4219g00010 962 SMART serkin_6 676 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4219g00010 962 Pfam Protein tyrosine and serine/threonine kinase 720 947 IPR001245 GO:0004672|GO:0006468
Pral4219g00010 962 SUPERFAMILY Protein kinase-like (PK-like) 712 953 IPR011009 -
Pral4219g00010 962 SMART LRR_typ_2 271 294 IPR003591 -
Pral4219g00010 962 SMART LRR_typ_2 127 151 IPR003591 -
Pral4219g00010 962 SMART LRR_typ_2 343 367 IPR003591 -
Pral4219g00010 962 SMART LRR_typ_2 199 223 IPR003591 -
Pral4219g00010 962 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 342 952 - -
Pral4219g00010 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 773 958 - -
Pral4219g00010 962 Gene3D Ribonuclease Inhibitor 393 632 IPR032675 -
Pral4219g00010 962 Pfam Leucine Rich Repeat 105 121 IPR001611 GO:0005515
Pral4219g00010 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Pral4219g00010 962 Gene3D Ribonuclease Inhibitor 289 392 IPR032675 -
Pral4219g00010 962 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Pral4219g00010 962 Gene3D Ribonuclease Inhibitor 193 288 IPR032675 -
Pral4219g00010 962 Gene3D Transferase(Phosphotransferase) domain 1 771 960 - -
Pral4219g00010 962 SUPERFAMILY L domain-like 312 627 - -
Pral4219g00010 962 Gene3D Phosphorylase Kinase; domain 1 684 770 - -
Pral4219g00010 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 316 630 - -
Pral4219g00010 962 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4219g00010 Pral-Chr4219 58943 62503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4219g00010 18 952 Receptor kinase-like Gene Family AT5G51350 55.579 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4219g00010 PK_Tyr_Ser-Thr 2.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4219g00010 - - aprc:113852384 1406.73