Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4218g00011 ATGGCCGGAAATCTTCCTGGAGTAGAGTGTGCTCGAAGAAGAAGGTTTCATCAGAGCGGAGTTTGGTCCGATTCACCCTCCTCCATAGCTTCTCATACTTCCACTAGACGCTCTTCTTTCTGTTTGTACACTAGCAACCATGAATCTCTTTCTTCTTCCTCTTTACTGCAAAGAAACTTGATTTACCAGGCATACCCACAAGAAGTGCTGGGAGGTGCAGCTAGAGAAGCCAAACAGAGATTGGATGAGAGATTTGGAACACAGAGGAAAACAGAGAATAAAAGGGAGAAGGTGAGAAATGAAGCAGAGTTGCAGATAGAGGTATATGGGTCAAAGAAAAATGGAAGCAGAAGATTCAGTTGGGGAAAATTGAGCTGGAAGGCTACAGAACAAGAAGAGTGTGCAGTGTGCTTAGAATCATTCAAGAATGGTGACACACTCATAAATCTTCCATGTGCACACAGGTTCCATTCAAGGTGTTTGGAGCCATGGCTGCAAAATAATTCTCACTGCCCTTGTTGCAGAACCACCATTATCTTTTCTCACTAG 549 0.4372 MAGNLPGVECARRRRFHQSGVWSDSPSSIASHTSTRRSSFCLYTSNHESLSSSSLLQRNLIYQAYPQEVLGGAAREAKQRLDERFGTQRKTENKREKVRNEAELQIEVYGSKKNGSRRFSWGKLSWKATEQEECAVCLESFKNGDTLINLPCAHRFHSRCLEPWLQNNSHCPCCRTTIIFSH 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4218g00011 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 179 IPR013083 -
Pral4218g00011 182 ProSiteProfiles Zinc finger RING-type profile. 134 175 IPR001841 -
Pral4218g00011 182 SUPERFAMILY RING/U-box 124 180 - -
Pral4218g00011 182 SMART ring_2 134 174 IPR001841 -
Pral4218g00011 182 FunFam Zinc finger family protein 108 180 - -
Pral4218g00011 182 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 38 176 - -
Pral4218g00011 182 Pfam Ring finger domain 133 175 IPR001841 -
Pral4218g00011 182 CDD RING-H2_PA-TM-RING 133 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4218g00011 Pral-Chr4218 75300 76850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4218g00011 1 85 C3H Transcription Factor Family AT2G15580 52.128 1.16e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4218g00011 - - qsa:O6P43_034430 241.121