Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4218g00008 ATGTGTTTACAAGACGCCGAGCAACTTGGCGCCGATATGGAGAACCCAGACGATAGAAGGAGCTCTTGGCCTTTGCATTGTGACCTTCTTCATACCCACATGGAAAAGGAACCTCCTCTTAGAACTTGCGGCGATCAGAGTTTTGGTTTTGGGAATTCATTCCCGCTGGAAAGCATAAGTGAGGACACGGTGATTGCAGACAAGAAACAGAACCACATAAACTTTGCCCCTGCTCTGCGATCTGGAGAGTGGTCAGATATCGGAGGTCGCCCTTATATGGAAGATACTCACATATGCATTGGAGACTTAGGAAAGAAGTTTGGTTATGATGTACTCAGTGAGGAAGTTATTTCCTTTTATGGGGTATTTGATGGGCACGGAGGGAAGAGTGCTGCAGTATTTGTCCGTGATCATCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTGTGGAGCTAGAAAAGGTGGTCACTAGGTCATTTTTACAGACAGATGCTGCATTTGCAGAGACATGCTCCCTTGAGTCTTCATTGTCTTCTGGTACAACTGCATTAACTGCAATTATTTTGGGGAGGTCTTTGCTAGTGGCCAACGCTGGAGACTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCTATAGAAATGTCAAAAGATCATAGGCCCTTGTGCATGAAAGAGAGGAAGCGAATTGAGTCTTTAGGCGGATTCATCGATGATGGTTATCTGAATGGCGAGTTAGCTGTCACGCGGGCTCTAGGCGACTGGCATCTCGAGGGCTTGAAGGAAGTGAGTGAAAGAGGAGGACCCTTATTAAGTGCTGAGCCAGAACTCAAACTAACCACACTGACCAAAGAGGATGAGTTTTTGATAATTGGAAGTGACGGAATCTGGGATGTGTTCAGCAGCCAAAATGCTGTAGATTTTGCAAGAAGGAGGCTTCAAGAACATAATGATGTGAAACTATGCTGTAAAGAGATGGTGGAGGAAGCCATAAAGAGAGACTCAGCAGATAACTTAACTGTTGTGATGGTTTGTTTTCACTCAGAACCACCACCACCTGTGGTGGCAGAGAGGCCAAGATTCGGAAGAAGCATATCTGCTGAGGGACTCCTGAATCTCAAGTCCTCCCTTGAAGGATAG 1140 0.4596 MCLQDAEQLGADMENPDDRRSSWPLHCDLLHTHMEKEPPLRTCGDQSFGFGNSFPLESISEDTVIADKKQNHINFAPALRSGEWSDIGGRPYMEDTHICIGDLGKKFGYDVLSEEVISFYGVFDGHGGKSAAVFVRDHLPRVIIEDADFPVELEKVVTRSFLQTDAAFAETCSLESSLSSGTTALTAIILGRSLLVANAGDCRAVLSRRGRAIEMSKDHRPLCMKERKRIESLGGFIDDGYLNGELAVTRALGDWHLEGLKEVSERGGPLLSAEPELKLTTLTKEDEFLIIGSDGIWDVFSSQNAVDFARRRLQEHNDVKLCCKEMVEEAIKRDSADNLTVVMVCFHSEPPPPVVAERPRFGRSISAEGLLNLKSSLEG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4218g00008 379 Gene3D - 61 350 IPR036457 -
Pral4218g00008 379 FunFam Probable protein phosphatase 2C 22 63 349 - -
Pral4218g00008 379 Pfam Protein phosphatase 2C 92 338 IPR001932 -
Pral4218g00008 379 PANTHER PROTEIN PHOSPHATASE 2C 67 344 IPR015655 GO:0004722|GO:0006470
Pral4218g00008 379 CDD PP2Cc 80 346 IPR001932 -
Pral4218g00008 379 SUPERFAMILY PP2C-like 72 348 IPR036457 -
Pral4218g00008 379 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Pral4218g00008 379 ProSiteProfiles PPM-type phosphatase domain profile. 80 346 IPR001932 -
Pral4218g00008 379 SMART PP2C_4 70 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4218g00008 Pral-Chr4218 53039 56864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4218g00008 69 379 PP2C-type Phosphatase Gene Family AT2G25620 61.905 9.40e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pral4218g00008 PP2C 1.7e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4218g00008 K14803 - gmx:100782648 560.836