Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4218g00007 ATGGCGAGTAATGGTACTGCAAAGATCCCTATCAATAATGATAATGAAGGTTCAGAAGCCGCCATTGAGATAAAGATTAAAACATTGGACTCACAAATTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAGGAACAAATTGCTTCTGTGACTGGAGTGTTGTCAGAGCGGCAGCGCTTAATTTGCCGAGGAAAAGTTTTGAAGGATGATCAACTCCTTTCTGCCTATCACGTTGAAGATGGTCATACCTTACATCTGGTTGTGAGGCAACCTGATCTACCTGGGAGTTTGCCCAATCAATCAGCTGATCCACATTCAAGCACAAACAATAGTCACAGTAATCAAATAGCTCCTGGCGTTTTTATTGAAACTTTTAATGTGCCTGTTCAGGGAGATGGGGTTCCTCCAGAAGTTAATAGGATTATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTCCAAGTGGTGGTGAAGGGATTGATGTCAGGGGACATGATTCCCGAGGGCTTGGGAGAACATCAGGTTCTAGTGGTATATCAGATTCATTTCATTCTCCACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATTGCGTAATGCATTCGGACTTCCGACGGCAGCTTCCTCTTTGGGATCATTACAGCCTCCTGTCATTCCTGATTCTTTGACAACTTTATCTCAGTACGTGACTCATCTAAGGCATGAATTTGAAGCCATCGCGAGAGAAGGGGGAAATTGTGCCCAAGCAGCTGAAGCTCATAGGAATGAATCATCAATTTCTTCTTCACCTTCAGGTTCTACATCACAAGGGCTTTTGTCACCTGCGTACTTGGCAGAAGTGTTGCATTCTACCAGACGGATGTTCATTGAACAGGCTAATGAGTGCTTACTTCAACTTGCAACACAACTTGAGAATCAAGCAAATGTAACTGATCCCCCGTTGCGGTCAAACACTCAGTCTAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCGTTTTTACTCGAGCTTGGTCGTACGACCATGGCATTACGTTTGGGTCATGCACCGTCTGAAGCTGTAGCTAATGGCGGACCAGCGGTTTTTATATCCTCATCTGGTCCTAACCATATTATGGTTCAGCCTCTTCCTTTTCAACCTGCGGCAAGCTTTGCCCCTGCCCCTGCCCCTGCCCCTGTTGGAGCCGTGCAGTCCCCTTCTGGTTTAGGTAGCGGACTTGGTTCAAGTTTCTACCCAAGGCGTATAGATATTCAAATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAAGAAAATGGGGATGCACAATCTGCCACAGTACAAAGAAATCCTGTTGAAATTTCTGTTAATCAAACAAGCTCTAGACTTCCAGAGGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCTAGCCACTTAGGTCGCAACCCTTCAGAATCTTCTGCTAATTCTATAGGTCTTTACTATCCTGTTATCGGGAGATTTCAGCATGCACCTTCTGGACATGGGAATAGTGACTCAGGATCTCAGTCTGCAGGTCAGCATCATGCTTCGGGTTTTCATGCAGTGCAACAGTCAACGCCTGAATCTACTGGGCAAAGGCAAAGCATGGATGATCCTGCAAGAAATGGATCTTCATCGATTCCTACCTTAAGACAGGAACCATCTAATACCCGCAGGGTGAACATCAATATTCTGACGGCTGGTGGACTCCAGAACAACCAAGAATCTGAGAGGCAGATACCCAATACTGTACTTCAATTTATAAGAACCCTTTTTCCTGGTGGTGAAGTTCATGTTGAAGATTCTAGTTCACAGGGAACGACTGGTGTTCCTACCTCAGATCATGCTGGACCATCAACAGGTGCTGCTCGTGCCCCAGAGTCAGAGCCCAGAGCTAGTGAGGAAGGCCTATTTTTGTCTAACTTGCTACGTGAGGTCATGCCTCTCATATCACAAGCAGGGTCTGGAACGCATGGAACTCCTCAAGGTGAAAATGCTTCAGACAATCAAACAGCTTCTGATTCTTCCACCCAGGTTGGGATGTCACGCAGACAAAGTGATTCTGAGCCAAGCCCTCCAAATCCTAAACGCCAAAAGAGGGAGTGA 2178 0.4541 MASNGTAKIPINNDNEGSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSLPNQSADPHSSTNNSHSNQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGGEGIDVRGHDSRGLGRTSGSSGISDSFHSPPEQAGLRNSSDRLRNAFGLPTAASSLGSLQPPVIPDSLTTLSQYVTHLRHEFEAIAREGGNCAQAAEAHRNESSISSSPSGSTSQGLLSPAYLAEVLHSTRRMFIEQANECLLQLATQLENQANVTDPPLRSNTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGHAPSEAVANGGPAVFISSSGPNHIMVQPLPFQPAASFAPAPAPAPVGAVQSPSGLGSGLGSSFYPRRIDIQIRRGTSTSSANVNREENGDAQSATVQRNPVEISVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSHLGRNPSESSANSIGLYYPVIGRFQHAPSGHGNSDSGSQSAGQHHASGFHAVQQSTPESTGQRQSMDDPARNGSSSIPTLRQEPSNTRRVNINILTAGGLQNNQESERQIPNTVLQFIRTLFPGGEVHVEDSSSQGTTGVPTSDHAGPSTGAARAPESEPRASEEGLFLSNLLREVMPLISQAGSGTHGTPQGENASDNQTASDSSTQVGMSRRQSDSEPSPPNPKRQKRE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4218g00007 725 SUPERFAMILY Ubiquitin-like 17 101 IPR029071 -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 164 199 - -
Pral4218g00007 725 CDD Ubl_ubiquitin_like 24 91 - -
Pral4218g00007 725 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Pral4218g00007 725 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 10 722 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 175 199 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 258 277 - -
Pral4218g00007 725 Gene3D - 15 119 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 521 582 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 674 725 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 621 658 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 98 119 - -
Pral4218g00007 725 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Pral4218g00007 725 MobiDBLite consensus disorder prediction 431 471 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 431 476 - -
Pral4218g00007 725 FunFam Large proline-rich protein BAG6 14 107 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 523 582 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 624 639 - -
Pral4218g00007 725 SMART ubq_7 22 93 IPR000626 GO:0005515
Pral4218g00007 725 MobiDBLite consensus disorder prediction 254 277 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 677 716 - -
Pral4218g00007 725 MobiDBLite consensus disorder prediction 94 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4218g00007 Pral-Chr4218 35527 45217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4218g00007 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 3.05e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4218g00007 K23390 - gmx:100783070 886.715