Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4218g00005 ATGGCGAGTAATGGTACTGCAAAGATCCCTATCAATAATGATAATGAAGGTTCAGAAGCCGCCATTGAGATAAAGATTAAAACATTGGACTCACAAATTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAGGAACAAATTGCTTCTGTGACTGGAGTGTTGTCAGAGCGGCAGCGCTTAATTTGCCGAGGAAAAGTTTTGAAGGATGATCAACTCCTTTCTGCCTATCACGTTGAAGATGGTCATACCTTACATCTGGTTGTGAGGCAACCTGATCTACCTGGGAGTTTGCCCAATCAATCAGCAACTGATCCACATTCAAGCACAAACAATAGTCACAGTAATCAAATAGCTCCTGGCGTTTTTATTGAAACTTTTAATGTGCCTGTTCAGGGAGATGGGGTTCCTCCAGAAGTTAATAGGATTATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTCCAAGTGGTGGTGAAGGGATTGATGTCAGGGGACATGATTCCCGAGGGCTTGGGAGAACATCAGGTTCTAGTGGTATATCAGATTCATTTCATTCTCCACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATTGCGTAATGCATTCGGACTTCCGACGGCAGCTTCCTCTTTGGGATCATTACAGCCTCCTGTCATTCCTGATTCTTTGACAACTTTATCTCAGTACGTGACTCATCTAAGGCATGAATTTGAAGCCATCGCGAGAGAAGGGGGAAATTGTGCCCAAGCAGCTGAAGCTCATAGGAATGAATCATCAATTTCTTCTTCACCTTCAGGTTCTACATCACAAGGGCTTTTGTCACCTGCGTACTTGGCAGAAGTGTTGCATTCTACCAGACGGATGTTCATTGAACAGGCTAATGAGTGCTTACTTCAACTTGCAACACAACTTGAGAATCAAGCAAATGTAACTGATCCCCCGTTGCGGTCAAACACTCAGTCTAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCGTTTTTACTCGAGCTTGGTCGTACGACCATGGCATTACGTTTGGGTCATGCACCGTCTGAAGCTGTAGCTAATGGCGGACCAGCGGTTTTTATATCCTCATCTGGTCCTAACCATATTATGGTTCAGCCTCTTCCTTTTCAACCTGCGGCAAGCTTTGCCCCTGCCCCTGCCCCTGCCCCTGTTGGAGCCGTGCAGTCCCCTTCTGGTTTAGGTAGCGGACTTGGTTCAAGTTTCTACCCAAGGCGTATAGATATTCAAATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAAGAAAATGGGGATGCACAATCTGCCACAGTACAAAGAAATCCTGTTGAAATTTCTGTTAATCAAACAAGCTCTAGACTTCCAGAGGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCTAGCCACTTAGGTCGCAACCCTTCAGAATCTTCTGCTAATTCTATAGGTCTTTACTATCCTGTTATCGGGAGATTTCAGCATGCACCTTCTGGACATGGGAATAGTGACTCAGGATCTCAGTCTGCAGGTCAGCATCATGCTTCGGGTTTTCATGCAGTGCAACAGTCAACGCCTGAATCTACTGGGCAAAGGCAAAGCATGGATGATCCTGCAAGAAATGGATCTTCATCGATTCCTACCTTAAGACAGGAACCATCTAATACCCGCAGGGTGAACATCAATATTCTGACGGCTGGTGGACTCCAGAACAACCAAGAATCTGAGAGGCAGATACCCAATACTGTACTTCAATTTATAAGAACCCTTTTTCCTGGTGGTGAAGTTCATGTTGAAGATTCTAGTTCACAGGGAACGACTGGTGTTCCTACCTCAGATCATGCTGGACCATCAACAGGTGCTGCTCGTGCCCCAGAGTCAGAGCCCAGAGCTAGTGAGGAAGGCCTATTTTTGTCTAACTTGCTACGTGAGGTCATGCCTCTCATATCACAAGCAGGGTCTGGAACGCATGGAACTCCTCAAGGTGAAAATGCTTCAGACAATCAAACAGCTTCTGATTCTTCCACCCAGGTTGGGATGTCACGCAGACAAAGTGATTCTGAGCCAAGCCCTCCAAATCCTAAACGCCAAAAGAGGGAGTGA 2181 0.4539 MASNGTAKIPINNDNEGSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSLPNQSATDPHSSTNNSHSNQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGGEGIDVRGHDSRGLGRTSGSSGISDSFHSPPEQAGLRNSSDRLRNAFGLPTAASSLGSLQPPVIPDSLTTLSQYVTHLRHEFEAIAREGGNCAQAAEAHRNESSISSSPSGSTSQGLLSPAYLAEVLHSTRRMFIEQANECLLQLATQLENQANVTDPPLRSNTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGHAPSEAVANGGPAVFISSSGPNHIMVQPLPFQPAASFAPAPAPAPVGAVQSPSGLGSGLGSSFYPRRIDIQIRRGTSTSSANVNREENGDAQSATVQRNPVEISVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSHLGRNPSESSANSIGLYYPVIGRFQHAPSGHGNSDSGSQSAGQHHASGFHAVQQSTPESTGQRQSMDDPARNGSSSIPTLRQEPSNTRRVNINILTAGGLQNNQESERQIPNTVLQFIRTLFPGGEVHVEDSSSQGTTGVPTSDHAGPSTGAARAPESEPRASEEGLFLSNLLREVMPLISQAGSGTHGTPQGENASDNQTASDSSTQVGMSRRQSDSEPSPPNPKRQKRE 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4218g00005 726 MobiDBLite consensus disorder prediction 622 659 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 678 717 - -
Pral4218g00005 726 CDD Ubl_ubiquitin_like 24 91 - -
Pral4218g00005 726 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Pral4218g00005 726 MobiDBLite consensus disorder prediction 98 120 - -
Pral4218g00005 726 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 10 723 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 524 583 - -
Pral4218g00005 726 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Pral4218g00005 726 MobiDBLite consensus disorder prediction 625 640 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 94 120 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 675 726 - -
Pral4218g00005 726 FunFam Large proline-rich protein BAG6 14 107 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 432 472 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 255 278 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 432 477 - -
Pral4218g00005 726 SUPERFAMILY Ubiquitin-like 17 100 IPR029071 -
Pral4218g00005 726 Gene3D - 15 120 - -
Pral4218g00005 726 SMART ubq_7 22 93 IPR000626 GO:0005515
Pral4218g00005 726 MobiDBLite consensus disorder prediction 165 200 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 176 200 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 259 278 - -
Pral4218g00005 726 MobiDBLite consensus disorder prediction 522 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4218g00005 Pral-Chr4218 35527 45217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4218g00005 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 3.06e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4218g00005 K23390 - gmx:100783070 893.264