Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4217g00030 ATGGCGAATCTGAAAGGAGGGACTCGACCGCCATGGGTGGGGCTTGGAGCTGCTGTGTGGATTCAAATAGCTTCTGGAAACGCCTACACCTTCCCTCTGTACTCTCACTCTCTCAGATCTGTTCTGGGTTTTAACCAGCGCCAGATTGCTTTCCTTGGTGTCGCCAACGATATTGGCGAGAACGTTGGCCTCCTTCCTGGTCTTGCCTCCAACAAGTTCCCTCCTTGGCTCATTCTCTCCGTTGGTGCTCTTCTCTCTTTTCTTGGTTATGGCGTTCTCTGGCTTTCTGTTAGTCGCACTGTTCTCTCTCTTCCGTACTCCGTGTTATGGATTGCTTCAGTTGTTGCCACCAACAGTACTGCATGGTTAACCACAGCTGTTCTTGTCACCAACATGAGAAACTTCCCTGTGAGCAGAGGTTCAGTCGCCGGAATCCTCAAAGGCTATGGAGGGTTAAGTGCTGCAGCTTTCACTGAAATTTACAGCCTAGTCCTTCACAATTCTTCCTCTAAGTTCCTCTTGTTCCTTGCCCTTGGCATTCCTATTACATGTTTCACCTTGATGTTTCTTGTCAGACCTTGCACTCCCGCTTCTGGCGAAGACTCCTCAGAAAATTCCCATTTTGTCTTCATCCAAGCCTCTAGTGTTGTCCTAGGTTTTTACCTTCTTGCAACCACAGTACTTAACGATGTTGTCTCCTTAAGTGATGTAGTGTCCTATGTTCTGATCTTTGTGATGATCCTCCTCCTTATGGCTCCCCTTGCCGTCCCCATAAAGATGACATTGTTTCCCAGAAAATCCATCAAACCAGAGACACCTGGGGCGCAAGTAGGATCTTCAGAGTGTGATGAGAAGTCAGTACCTTTGTTGCTTCCAGCATCTTCGTCTTCAGCAACACTTGGGAGTTTTTATGACAGTGATGAGTCGGCTGAGGTGGCTATGCTTCTTGCTGTGGGAGAAGGGGCAGTGAACAAGAAGAGGAGGAGGCCTAAAAGAGGGGAAGATTTTACATTTCGTGAGGCCGTGATTAAAGCTGATTTTTGGCTTCTGTTTCTGGTTTTCTTTGTTGGTGTAGGAACTGGGGTTACTGTGGTAAATAATCTAGCACAGATTGGGATCGCACAAGGTGTGGAAAAGACCACAATCTTGTTGTCCACTTTTAGCTTCTGCAATTTCGTGGGTCGGCTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAGAACCAAAACAATCCCACGAACAGTGTGGATGACATGCACGCAGATTGTAATGATCATCTCGTACTTGCTGTTTGCATATACTGTGAATGGAACTCTTTATCCTGCAATAGCATTTCTGGGAATCTGCTATGGCGTGCAGTTTTCTGTCATGATTCCTGCAGTTTCTGAGTTATTTGGGCTGAAACACTTTGGTGTTCTTTACAACTTCATGTGCTTGGGAAATCCTCTTGGCGCCTTCCTTTTCTCTGCCCTCTTAGCCGGCCATGTCTACGACGCTGAATCCGCCAAGCAGCATGGTCTGAACCACCTGATGCATGGCTCTATAAGTAAGGCCTGCGTTGGTCCCTCCTGCTTTAAGCTGACCTTTTTGGTTCTGGCTGGTGTGTCCGCTGTAGGCACCTTCTTGAGCATTATTTTGACTTTGAGGGTGAAGCCTGTTTATCAGATGCTTTATTCTGGTGGTTCTTTTAGGCTCCCCCAATCCTCTTCAAGGCATTAA 1719 0.47 MANLKGGTRPPWVGLGAAVWIQIASGNAYTFPLYSHSLRSVLGFNQRQIAFLGVANDIGENVGLLPGLASNKFPPWLILSVGALLSFLGYGVLWLSVSRTVLSLPYSVLWIASVVATNSTAWLTTAVLVTNMRNFPVSRGSVAGILKGYGGLSAAAFTEIYSLVLHNSSSKFLLFLALGIPITCFTLMFLVRPCTPASGEDSSENSHFVFIQASSVVLGFYLLATTVLNDVVSLSDVVSYVLIFVMILLLMAPLAVPIKMTLFPRKSIKPETPGAQVGSSECDEKSVPLLLPASSSSATLGSFYDSDESAEVAMLLAVGEGAVNKKRRRPKRGEDFTFREAVIKADFWLLFLVFFVGVGTGVTVVNNLAQIGIAQGVEKTTILLSTFSFCNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIVMIISYLLFAYTVNGTLYPAIAFLGICYGVQFSVMIPAVSELFGLKHFGVLYNFMCLGNPLGAFLFSALLAGHVYDAESAKQHGLNHLMHGSISKACVGPSCFKLTFLVLAGVSAVGTFLSIILTLRVKPVYQMLYSGGSFRLPQSSSRH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4217g00030 572 Gene3D MFS general substrate transporter like domains 341 556 IPR036259 -
Pral4217g00030 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Pral4217g00030 572 CDD MFS_Mch1p_like 10 540 - -
Pral4217g00030 572 SUPERFAMILY MFS general substrate transporter 236 552 IPR036259 -
Pral4217g00030 572 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Pral4217g00030 572 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4217g00030 Pral-Chr4217 134167 137311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4217g00030 5 572 Nodulin-like Gene Family AT1G80530 55.536 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4217g00030 - - gmx:100794012 827.394