Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4217g00022 ATGGGTAGCAAAAAGAAACAAGTTGGAGAAAAATCAAGCGATGGTAGTGGAAGTCAAAGCACAGTAGGAGATAGCAGCTCCAAAACTTATGATAAAGATACTGAGGTATTTATTTCCATGTCTCAAGAGTTAAAGAGTGAAGGGAACAAGCTGTTCCAAAGGGGAGATCTTGAAGGAGCCGTCTCAAAATATGGGAAAGCCATTAAATTGCTACCAAGAAATCATATAGATGTGTCTTGTCTGCGGAGCAATTTGGCTGCATGCTACATGCAGTTGGGAATCAGCGAGTACCCGAGGGCCATTCGTGAATGCGATTTAGCCCTTGAAGTAACTCCAAAGTACAGTAAAGCCCTTTTGAAGAGGGCAAGGTGCTATGAGGCCTTAAATAGACTGGATTTAGCTGTGAAAGATGTTAGAACAGTACTGAAGATGGAGCCAAACAATACCATGGCATTGGAAATTTCGGAGAAGGTGAAAAATGCACTTGAAAAGAAGGGATTAAAAGAAGATGATATAGCAATTGAGTTGCCTTCTGATCATACTAAACTTCCTTGTGTGCCTCCTGAAGGAGTAAAAGAGAAGAAGCGCAAGAAGAGCAAAAAGGTTGAGTTGGTGACTGCAGATAATGTAGGTATTGAAAAGCCTGCTGAGGAGAAGTTGGAAGACAAGAAGGCGGAGGACAGTGTTGAGCAGAAGAAGGCTGTGAAAAAATCCAAAGAGAAGTTGGAAGACTGTGTTGAGCAGAAGGAGACTGTGAAAAAATCTGAAGAGAAGTTGGAAGACAAGAAGGCGGAAGATAGTGTTGAGCAGAAGGAGGCTGTGAACAAATCCAGAGAGAAGTTGGAAGAGAAGAAGGCAGAGGACAATATTGAGAAGAAGAAGGCTGTGAACAAATCCAAAAAGAAAGTGGCCAAGGAAAAGAGTAACGAGAAGAAGGCTGATATAAAGGAGGTTATTGAGGAAAAATTTAATGATGGAAAGGAAGATACAGCTAAGAAAACAGTGAAACTTGTTTTTGGGGAGGACATTAGATTTGCAGAATTGCAAGTCAATTGCAGCCTCCAGCATCTAAGGGAAGTTATCAGCGATCGATTTCCAAGCCTAGGAGCAGTTCTTGTCAAATACAGAGATCAAGAAGGTGATTTAGTCACAATCACTTCTGATGAAGAATTAAGATGGGCTGAAAGATCAGCAGGATCAGAGAGTTCTATACGCCTATACATAGTGGATGCTGATCCTAAGCAGGATCCACTGTTTGAGAAAATTAATGAAAAGAAGGAGCAAAAGCCTGTTATTAGTAATGAACTTGAGAGTAGTTGTGTGGAAAAAGAAAAGGAAATGATTAGGCCATCTTGCATTGAGGATTGGATAATCCAGTTTGCCCAACTGTTCAAGAACCATGTTGGAATCGAATCTGACAGATATTTAGATTTTCATGAACTTGGAATGAAACTCTATTCTGAGGCTATGGAGGAGACAGTTACTAGTGAAGAAGCACAAAGCCTGTTTGACATGGCAGGAGCTAAGTTCCAGGAAATGGCAGCTTTAGCATTGTTCAACTGGGGAAATGTTCACATGTCCAGGGCAAGAAAAAAGGTGAATTTCACAGAAGAATCTTCTAAAGAGCACCTGCATGAAGAGATAAAAAATTCATATGAATGGGTGCAGGAAGAATATAAAAGAGCAGGAGAAAAATATGAAGCAGCCATTAAAATTAAACCCGATTTTTATGAAGGCTTCCTGGCGCTAGGGCAACGGCAGTTTGAGCAAGCAAAACTTTCTTGGTATTATGCAATTAGCACAATTGTTGACTTAGCAACATGGCCCTCTACCGAAGTTCTTCAGCTTTACAACAATGCTGAAGAAAACATGGAGAAAGGAATGCAGATATGGGAAGAATCAGAAAAACGTTGCTTGAATGAAGATCCTAAATCAAAGGATATCAAATTCCTTTTACAGAAGATGGGATTGGATTGCCTATTGCAAAATATATCATCAGAAGAAATAGCAGCTCAGGCAGCAAATTTGAGGTCTCAAATAAATATCCTTTGGGGTACCATGTTGTATGAGCGTTCAGTTATGGAATTCAAACTAGGGCTACCAGTATGGCATGAATGTCTGGAAGTTGCAGTTGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTAATGTTGAAGAACCACTGTTCAAATAACACTGCTGCTGAGGGTCTAGGATTCAACATTGATGAAATAGTCCAAGCATGGAACGAGATGTATGAAGCTAGAAGGTGGCAGAGTCGGGTTTCATCATTTCATTTGGAACCCTTATTCAGAAGGCGAGCTTCAAAAATTTATCATGCCTTGGAGCTTGCATGA 2367 0.4047 MGSKKKQVGEKSSDGSGSQSTVGDSSSKTYDKDTEVFISMSQELKSEGNKLFQRGDLEGAVSKYGKAIKLLPRNHIDVSCLRSNLAACYMQLGISEYPRAIRECDLALEVTPKYSKALLKRARCYEALNRLDLAVKDVRTVLKMEPNNTMALEISEKVKNALEKKGLKEDDIAIELPSDHTKLPCVPPEGVKEKKRKKSKKVELVTADNVGIEKPAEEKLEDKKAEDSVEQKKAVKKSKEKLEDCVEQKETVKKSEEKLEDKKAEDSVEQKEAVNKSREKLEEKKAEDNIEKKKAVNKSKKKVAKEKSNEKKADIKEVIEEKFNDGKEDTAKKTVKLVFGEDIRFAELQVNCSLQHLREVISDRFPSLGAVLVKYRDQEGDLVTITSDEELRWAERSAGSESSIRLYIVDADPKQDPLFEKINEKKEQKPVISNELESSCVEKEKEMIRPSCIEDWIIQFAQLFKNHVGIESDRYLDFHELGMKLYSEAMEETVTSEEAQSLFDMAGAKFQEMAALALFNWGNVHMSRARKKVNFTEESSKEHLHEEIKNSYEWVQEEYKRAGEKYEAAIKIKPDFYEGFLALGQRQFEQAKLSWYYAISTIVDLATWPSTEVLQLYNNAEENMEKGMQIWEESEKRCLNEDPKSKDIKFLLQKMGLDCLLQNISSEEIAAQAANLRSQINILWGTMLYERSVMEFKLGLPVWHECLEVAVEKFELAGASPTDIAVMLKNHCSNNTAAEGLGFNIDEIVQAWNEMYEARRWQSRVSSFHLEPLFRRRASKIYHALELA 788
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4217g00022 788 PANTHER PROTEIN CLMP1 3 786 IPR044517 -
Pral4217g00022 788 Gene3D - 330 413 - -
Pral4217g00022 788 ProSiteProfiles PB1 domain profile. 332 411 IPR000270 GO:0005515
Pral4217g00022 788 SMART tpr_5 115 148 IPR019734 GO:0005515
Pral4217g00022 788 SMART tpr_5 41 74 IPR019734 GO:0005515
Pral4217g00022 788 SMART tpr_5 79 114 IPR019734 GO:0005515
Pral4217g00022 788 MobiDBLite consensus disorder prediction 1 29 - -
Pral4217g00022 788 CDD PB1 334 408 - -
Pral4217g00022 788 SUPERFAMILY TPR-like 30 155 IPR011990 GO:0005515
Pral4217g00022 788 SUPERFAMILY CAD & PB1 domains 331 421 - -
Pral4217g00022 788 SMART PB1_new 332 411 IPR000270 GO:0005515
Pral4217g00022 788 MobiDBLite consensus disorder prediction 218 240 - -
Pral4217g00022 788 MobiDBLite consensus disorder prediction 253 289 - -
Pral4217g00022 788 MobiDBLite consensus disorder prediction 12 29 - -
Pral4217g00022 788 Coils Coil 242 298 - -
Pral4217g00022 788 Pfam PB1 domain 334 410 IPR000270 GO:0005515
Pral4217g00022 788 Coils Coil 301 321 - -
Pral4217g00022 788 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Pral4217g00022 788 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Pral4217g00022 788 Gene3D Tetratricopeptide repeat domain 32 177 IPR011990 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4217g00022 Pral-Chr4217 107006 111326 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4217g00022 24 148 Calmodulin-binding Proteins AT3G25230 32.847 2.15e-10 62.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4217g00022 K26538 - gmx:100807387 975.696