Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00076 ATGGTGCATTCAAAGAAGTTCAGAGGCGTCAGACAGCGTCACTGGGGCTCCTGGGTCTCCGAAATTCGCCACCCGCTCCTGAAGAGGAGGGTGTGGCTGGGGACATTTGAGACGGCGGAAGAAGCGGCGCGAGCGTACGATCAAGCTGCCATTTTGATGAGTGGTCGGAATGCTAAGACCAATTTCCCGATAACCCAGACTCCGGACGGTGATCCAAAGGCGGCTGTGGCGGCCTCGGCCACCGATCATAGCAAGGCAGGGGCGGCGAGGGATCTGGAAGAGATTCTGCGCGCGAAGCTGAGGAAATGCGGGAAGCTTCCGTCGCCGTCCATGACTTGCCTGAGGCTGGACACCGAGAACTCCAATATCGGAGTGTGGCAGAAACGTGCCGGCCAGCGTACTGATAGCTCCAACTGGGTGATGACAGTGGAGCTGGGAAAGAAGACCAATAGCAACAGCAACAGTAATGAAGCGGAGAAAACGACGTCGCCGTGGACGTGCGATGAGCGTGCAACCTCAGAAGGAAATGAAGTGGTCATGGAAGGAGGAGGAGGAGGGATGAACGAGGAAGAAAGAATAGCACTGCAAATGATCGAAGAACTTCTTAACAGAAACTGTCCAAGTCCTCCAGGACCTTCATTTCACGATATGGTTGAAGAGGACCATAACCATGCTTATGCTGAAGGCTTTCTCTTTTGA 699 0.5422 MVHSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPDGDPKAAVAASATDHSKAGAARDLEEILRAKLRKCGKLPSPSMTCLRLDTENSNIGVWQKRAGQRTDSSNWVMTVELGKKTNSNSNSNEAEKTTSPWTCDERATSEGNEVVMEGGGGGMNEEERIALQMIEELLNRNCPSPPGPSFHDMVEEDHNHAYAEGFLF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00076 232 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Pral4214g00076 232 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Pral4214g00076 232 MobiDBLite consensus disorder prediction 148 168 - -
Pral4214g00076 232 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Pral4214g00076 232 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Pral4214g00076 232 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Pral4214g00076 232 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Pral4214g00076 232 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Pral4214g00076 232 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Pral4214g00076 232 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Pral4214g00076 232 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00076 Pral-Chr4214 463493 464603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00076 1 205 AP2-EREBP Transcription Factor Family AT1G15360 57.971 8.28e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4214g00076 AP2 9.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00076 - - adu:107472039 285.034