LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4214g00059	ATGGCCACCACCAAGGCCATAGCCAGAGACGAATGCGATTATGATAGTAGCTGTTCCTCTCTCACCACTCCGCCGGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCAGCAGCCGCCGCCGTAGCAGCTCCGTCTCCGTTTGTTCCACTACCACCACAGACACCACCACTTCCTCTCTGTTCCACGGTTCCCACGCCAAGAAGCCTCACAAGGCTAACCAAGCAGCATGGGAGGCTATGTCCCGCCTTCGCCGCGACAGTAACGGCCAACTAGGCCTCCACCACTTCCGCCTTCTCCGGCGACTCGGCGGCGGCGACATCGGCAACGTCTACCTCTGTCAGATTAGGAACCCCCTCGTTGCGGGGTCGAAGCAGAGTCTCTACGCCATGAAAGTGGTCGACAGAGAAGCGCTTTCTGTGAGAAACAAGTTGCAGAGAGCTATGATGGAGAAGGAGATCCTGGGCATGCTTGATCACCCGTTTTTGCCCACTTTATATGCTGAGTTTGAGGCTTCTCATTACTCTTGCCTGGTCATGGAGTTTTGTCCTGGCGGCGATTTGTATGCTTCTCGCCAGCGTCAGCCAGGGAAAAGATTTAGCATTCAATCGACCAAGTTTTATGCGGCTGAGACACTGTTAGGTTTGGAGTATCTTCACATGATGGGCATAGTTTATAGAGATTTGAAGCCAGAGAATGTGCTGGTGAGGGAGGATGGGCATATTATGCTCTCTGATTTTGATCTATCTCTCAAATGCGACGTCGTTCCTAAGCTGCTGAGAAGTAAATCCAGTTTCAAAAGCATTCCAAGGAGCTCTTCATCATCATCAACGTCTCCTGCCTGCGCTACCCCCATGCAATCTTGTTTCTCATCAGCATCGTTTCGCAGCAAGAGCAAGAGAGAAAGTAGAGTCACAACAATCATAAGAGAAAATGCTGGAGTCCAAAAACAACAGGAACAAAAACAAGATGAAGAAGACGACATTGATGATGAAGATGATGATGAGCCTGAGCTAGTGGCAGAGCCTATAAATGCCAAGTCTATGTCATTTGTAGGGACTCATGAGTACTTAGCACCAGAAGTGATATCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGTTATACGGAAGAACACCTTTCAAAGGTGAGAACAATGGGAAAACACTCATAAACATCCTGAAGCAGCCATTGGCTTTTCCCAGAATTGCAGCTAGCAGCAGCAAGGAGTATGAAGAGATGGTGAGAGTTCAAGACCTGATAAGCAAACTATTGGTGAAGAATCCCAAGAAGAGAATTGGAAGTTGCATGGGTTCTGTTGAAATCAAGAGGCATGAATTCTTCAAAGGTGTCAATTGGGCTCTGATTAGATCAATCAAACCTCCTGAGGTTCCTGCTGATATGAACAAGATTAGAAGTAGCAGAGTTTTGTTACCAAAACTAAGCAAGAAAGATAGAGATCAACCCTATCAGATTTCTCATCATTTTGACTACTTCTAA	1530	0.4758	MATTKAIARDECDYDSSCSSLTTPPESSRSWMTNLSFSSRRRSSSVSVCSTTTTDTTTSSLFHGSHAKKPHKANQAAWEAMSRLRRDSNGQLGLHHFRLLRRLGGGDIGNVYLCQIRNPLVAGSKQSLYAMKVVDREALSVRNKLQRAMMEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYASRQRQPGKRFSIQSTKFYAAETLLGLEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKSIPRSSSSSSTSPACATPMQSCFSSASFRSKSKRESRVTTIIRENAGVQKQQEQKQDEEDDIDDEDDDEPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQPLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRIGSCMGSVEIKRHEFFKGVNWALIRSIKPPEVPADMNKIRSSRVLLPKLSKKDRDQPYQISHHFDYF	509

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4214g00059	509	FunFam	protein kinase PINOID	183	251	-	-
	Pral4214g00059	509	SMART	serkin_6	97	458	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4214g00059	509	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	224	236	IPR008271	GO:0004672\|GO:0006468
	Pral4214g00059	509	FunFam	protein kinase PINOID 2	95	182	-	-
	Pral4214g00059	509	MobiDBLite	consensus disorder prediction	309	336	-	-
	Pral4214g00059	509	Gene3D	Phosphorylase Kinase; domain 1	95	182	-	-
	Pral4214g00059	509	CDD	STKc_phototropin_like	95	476	-	-
	Pral4214g00059	509	Pfam	Protein kinase domain	348	458	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4214g00059	509	Pfam	Protein kinase domain	98	253	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4214g00059	509	SUPERFAMILY	Protein kinase-like (PK-like)	81	478	IPR011009	-
	Pral4214g00059	509	PANTHER	FLIPPASE KINASE 1-RELATED	39	479	-	-
	Pral4214g00059	509	ProSiteProfiles	Protein kinase domain profile.	97	458	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4214g00059	509	Gene3D	Transferase(Phosphotransferase) domain 1	346	476	-	-
	Pral4214g00059	509	FunFam	serine/threonine-protein kinase D6PK-like	346	476	-	-
	Pral4214g00059	509	Coils	Coil	315	335	-	-
	Pral4214g00059	509	Gene3D	Transferase(Phosphotransferase) domain 1	183	252	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4214g00059	Pral-Chr4214	353145	355141	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4214g00059	1	509	AGC Kinase Gene Family	AT2G26700	56.985	0.0	590

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Pral4214g00059		Pkinase	8.9e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4214g00059	K08286		-	gmx:100777988	667.537