Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00036 ATGTCGAGCCAGCACGATGAGATAGAACTGTCAAGAGAGGCCAACCATTTCAGCCTCTCTACTGGTTTATTGCCTTCACTTGGAGCCAGCCATGCCCCCAGAATTAGCCTCAAAACCTGCATTATCTCACCTTATGATCGTCGTTACAGGTTGTGGGAGAACTTTCTGATCATTCTGGTCGGGTACACTGCATGGGTATCGCCATTTGAGTTCGGCTTCCTGGAAAAGCCAGTAGGGTTCCTCTCGATCACGGACAATGTTACGAATGGACTCTTCGCTGTGGATATAATTCTCACATTCTTCGTCGCTTACATTGACAAACTCACTTACCTTTTGGTTGAAGATCGAAAAGCCATTGCCGCGAGATATCTCAAGACTTGGTTCGTCTTCGATGTCATCTCCATTATCCCTTCGGAGCTCGCCCGCCAAATTCCCATCTCACCGTTTCAATCCTATGGACCTTTCAACATGCTTCGTCTTTGGCGAATCCGAAGAGTTGGTGCCCTGTTTGCTAGACTGGAGAAGGACATACACTATAACTATTTCTGGGTTCGGTGTGCTAAGCTTATTTGTGTGACCCTCTTTGTTGTACACTTAGCCGGATGCTTCTTTTATTATATTGCCGCACATTCTGATCCCAAACAGACTTGGATCGGGCTATCATTGGAAGACTTCCATCAAGAGAGCTATTATACAAAATATGTGTATTCTATGTACTGGTCTATCACTACTTTAGCCACTGTTGGCTATGGCGATTTGCATCCAGTAAATACGTCAGAGATGGTCTTTGACATCTGTTACATGTTGTTCAATCTGGGTTTAACGTCCTATTTGATTGGTAATATGACCAACTTAATTGTCAACGGCACAAGTCGAACCAGTAGATTTAGGGATACCATACAGGCTGCCTCAAATTTTGCGGAACGGAACCATTTGCCTTCTCGTCTGAAAGACCAGATGCTTGAACACATGTGTTTGAGGTTCAGAACAGACTCAGAGGGATTGCAGCATCACGAGAGCCTCGATACTCTTCCTAAAGCTATCAGATCAAGCATCTCACGTAATCTTTTCTACTCTGTGGTAGATGATGTCTACTTGTTTTCTGGAGTTTCAAAGAACTTGCTTTTTCAACTGGTAACAGAGATGAAAGCAGAGTATTTCCCCCCGAAAGAAGATGTTATCTTGCAGAACGAAGAACCAACTGATCTTTATATCATAGTCACTGGTGCTGCGGACTTGCTAGTTTTCAAAAATGGAGTCGAAGAGGCCGTAGGCGAGGCTAGAGCTGGTGATGTTTTCGGCGAGATCGGAGTGCTTTGCTATAGACTACAACCCTTTACCGTTCGAACCAAGCGACTGAGCCAGCTACTGAGGTTGAACCGTACCACATTTTTAAATGCTATTCAGGCCAACGTGGGAGATGGGAACGTAATCATGAATAATCTCCTTCAGCATTTGAAAGAACTTAAGGACCCATTTATGGATGGAATCCTAGTGACAACAGAGAACTTGCTGGCCAGTGGTAGGGTGAATCTACCGCTTAGTCTGTCCTTCGCCGCATTAAGAGGAGATGACTGGTTGTTGCATCAATTGTTGAATCGGGGCTTGGATCCAAATGAATCCGACAACAAAGGAAGGACTGCTTTGCACATAGCAGCATCCAAAGGGAGCTTGGACCATGTCAGGCTTCTTTTAGATCATGGGGCATATCCAAACATTAGAGATTATGATGGTAGTGTCCCATTATGGGAGGCAATAGTGGGTGGACACGAATCCGTGAGCAAGCTGTTGGTAAAAAATGGCGCTAACTTAGAATGTGGAGATATGGGTCAATTTGCATGCATTGCCGCTGAACAGGGCAACCTGAACTTGCTCAAGGATATAGTGAAACATCGAGGGGATGTATCACTTTCTAGGAATTATGATGGGACCACAGCATTACATATTGCTGTCTGTGAAGGCAATGTTGAGATAGTCAAGTTCCTTTTGGATCAAGGGGCTGACGTTGACAAACCAGACAGGCATGGTTGGAAGCCAAGAGCCCTAGCAGATCAACAGGGACATGAGGAAATTAAGGTTATGTTTCAGTCTATTGTGGAGCCTAAGGCTCCAACTCCTGCCTCTTCGACTCCTGAGAGGTCTGTTGGAAGAGTTACAAGAACTGGGAGGAACCATGGAAGTCACCATGCAAGAGTAACAATCAGTTGCCCTGAAAAGGTTGAAATTGCAGGAAAAGTTGTGCTCCTACCAGGAAGCTTCAAGGAGCTACTTGAGATTGGAGCCAATAAATTTGGTATCACTCCCGCTAGGATTCTGAGCAGGGATGGAGCTGAAATTGATGATCTAGATGTGATTAGAGATGGTGATCATCTTTTGTTTGTCAGTTCTCATAAACCCAGTTCCCGCTCGCCTGATTTTTTGCAATAA 2427 0.4479 MSSQHDEIELSREANHFSLSTGLLPSLGASHAPRISLKTCIISPYDRRYRLWENFLIILVGYTAWVSPFEFGFLEKPVGFLSITDNVTNGLFAVDIILTFFVAYIDKLTYLLVEDRKAIAARYLKTWFVFDVISIIPSELARQIPISPFQSYGPFNMLRLWRIRRVGALFARLEKDIHYNYFWVRCAKLICVTLFVVHLAGCFFYYIAAHSDPKQTWIGLSLEDFHQESYYTKYVYSMYWSITTLATVGYGDLHPVNTSEMVFDICYMLFNLGLTSYLIGNMTNLIVNGTSRTSRFRDTIQAASNFAERNHLPSRLKDQMLEHMCLRFRTDSEGLQHHESLDTLPKAIRSSISRNLFYSVVDDVYLFSGVSKNLLFQLVTEMKAEYFPPKEDVILQNEEPTDLYIIVTGAADLLVFKNGVEEAVGEARAGDVFGEIGVLCYRLQPFTVRTKRLSQLLRLNRTTFLNAIQANVGDGNVIMNNLLQHLKELKDPFMDGILVTTENLLASGRVNLPLSLSFAALRGDDWLLHQLLNRGLDPNESDNKGRTALHIAASKGSLDHVRLLLDHGAYPNIRDYDGSVPLWEAIVGGHESVSKLLVKNGANLECGDMGQFACIAAEQGNLNLLKDIVKHRGDVSLSRNYDGTTALHIAVCEGNVEIVKFLLDQGADVDKPDRHGWKPRALADQQGHEEIKVMFQSIVEPKAPTPASSTPERSVGRVTRTGRNHGSHHARVTISCPEKVEIAGKVVLLPGSFKELLEIGANKFGITPARILSRDGAEIDDLDVIRDGDHLLFVSSHKPSSRSPDFLQ 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00036 808 SUPERFAMILY cAMP-binding domain-like 291 486 IPR018490 -
Pral4214g00036 808 CDD CAP_ED 366 471 IPR000595 -
Pral4214g00036 808 ProSiteProfiles Ankyrin repeat profile. 544 576 IPR002110 GO:0005515
Pral4214g00036 808 ProSiteProfiles Ankyrin repeat region circular profile. 642 674 - -
Pral4214g00036 808 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Pral4214g00036 808 Gene3D - 513 697 IPR036770 -
Pral4214g00036 808 Gene3D Jelly Rolls 331 491 IPR014710 -
Pral4214g00036 808 ProSiteProfiles Ankyrin repeat profile. 642 674 IPR002110 GO:0005515
Pral4214g00036 808 FunFam Potassium channel KAT2 354 490 - -
Pral4214g00036 808 PRINTS EAG/ELK/ERG potassium channel family signature 85 95 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4214g00036 808 PRINTS EAG/ELK/ERG potassium channel family signature 234 251 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4214g00036 808 PRINTS EAG/ELK/ERG potassium channel family signature 62 69 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4214g00036 808 PRINTS EAG/ELK/ERG potassium channel family signature 96 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4214g00036 808 PRINTS EAG/ELK/ERG potassium channel family signature 278 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4214g00036 808 PRINTS EAG/ELK/ERG potassium channel family signature 260 271 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4214g00036 808 Pfam Cyclic nucleotide-binding domain 386 470 IPR000595 -
Pral4214g00036 808 ProSiteProfiles cAMP/cGMP binding motif profile. 366 485 IPR000595 -
Pral4214g00036 808 PANTHER POTASSIUM CHANNEL AKT1 15 795 IPR045319 GO:0005249|GO:0006813
Pral4214g00036 808 FunFam Potassium channel KAT3 51 288 - -
Pral4214g00036 808 SMART ANK_2a 511 540 IPR002110 GO:0005515
Pral4214g00036 808 SMART ANK_2a 642 671 IPR002110 GO:0005515
Pral4214g00036 808 SMART ANK_2a 608 637 IPR002110 GO:0005515
Pral4214g00036 808 SMART ANK_2a 577 606 IPR002110 GO:0005515
Pral4214g00036 808 SMART ANK_2a 544 573 IPR002110 GO:0005515
Pral4214g00036 808 Pfam Ion transport protein 50 293 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4214g00036 808 Pfam Ankyrin repeats (3 copies) 615 672 IPR002110 GO:0005515
Pral4214g00036 808 Pfam Ankyrin repeats (3 copies) 516 606 IPR002110 GO:0005515
Pral4214g00036 808 MobiDBLite consensus disorder prediction 702 721 - -
Pral4214g00036 808 SUPERFAMILY Voltage-gated potassium channels 44 287 - -
Pral4214g00036 808 Gene3D - 53 288 - -
Pral4214g00036 808 ProSiteProfiles KHA domain profile. 731 808 IPR021789 -
Pral4214g00036 808 ProSiteProfiles Ankyrin repeat region circular profile. 577 605 - -
Pral4214g00036 808 MobiDBLite consensus disorder prediction 702 730 - -
Pral4214g00036 808 SMART cnmp_10 366 483 IPR000595 -
Pral4214g00036 808 ProSiteProfiles Ankyrin repeat region circular profile. 544 575 - -
Pral4214g00036 808 PRINTS Ankyrin repeat signature 658 672 IPR002110 GO:0005515
Pral4214g00036 808 PRINTS Ankyrin repeat signature 545 560 IPR002110 GO:0005515
Pral4214g00036 808 Pfam KHA, dimerisation domain of potassium ion channel 731 793 IPR021789 -
Pral4214g00036 808 SUPERFAMILY Ankyrin repeat 478 695 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00036 Pral-Chr4214 230812 234880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00036 98 795 Ion Channels AT2G26650 62.732 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00036 K21867 - zju:107432387 1110.9