Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00035 ATGTGCAGACGTCATACACAATTGCTCCTCTGCTTATTCATCACCTTCTTCATCAATCTTCCCTTCCCTTCCTTTGCTGATGTTGGAACTGCCGCTCAATATTCTCCTCCATATTTACCGACGGGATGCTACGGCGGCGAGGCCTTACAGTTCCCTTCGAGCAACCTGTTTGCGGCGGCCGGAGATGGAATATGGGACAACGGGGCAGCGTGTGGGAGGCAGTACTTGGTAAGATGCATAAGTGCAGAGCAACCCAGGACTTGTATTCCGCAGCAGATCATTCAGATCAAGATCGTTGATTATGCGGTTTCCACCGTGTCGACTCCGTCGGCCACCGGAACCACCATGGTTCTCTCTCAGAAAGCTTTCCAGACCATTGCTAATTCATCTGCTGGTCTCATTAATATAGAGTTTCAACAGGTCTGA 426 0.5 MCRRHTQLLLCLFITFFINLPFPSFADVGTAAQYSPPYLPTGCYGGEALQFPSSNLFAAAGDGIWDNGAACGRQYLVRCISAEQPRTCIPQQIIQIKIVDYAVSTVSTPSATGTTMVLSQKAFQTIANSSAGLINIEFQQV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00035 141 Pfam Lytic transglycolase 63 138 IPR009009 -
Pral4214g00035 141 Gene3D - 25 141 IPR036908 -
Pral4214g00035 141 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 7 140 - -
Pral4214g00035 141 SUPERFAMILY Barwin-like endoglucanases 9 141 IPR036908 -
Pral4214g00035 141 CDD DPBB_EG45-like 27 139 - -
Pral4214g00035 141 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 141 IPR007112 -
Pral4214g00035 141 SMART dpbb_1 58 138 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00035 Pral-Chr4214 229265 230449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00035 4 141 Expansin Gene Family AT4G17030 29.605 1.75e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00035 - - gsj:114411714 206.838