Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00024 ATGAAGGACCCAGAAGAAGAACAAGTTAAATCAAGAAAGCCTATGCAGAAACACACGGATCGTAGAAGAAGAGGTAGGAGAAGAAGCCATTGGAAACCAGAGATATTAAAAGAAGAAGGGGTTGATTTAGAACTGAATCCTTATGCTGCTTCTTGCAATAGCCTTGAGTTCACCCATAGGCCTGGCTATGGCCAGCTTGGGACAAAGTGTGTGGTCAAAGCTAACCACTTTCTCGCAGATATATCAGCATCTGACTTGAGCCATTACAGTGTTAAGATAGCGCCTGAAGTTACTTCTCGTAAAATAAGCAAAGCTATCATTGCTGAGTTGGTGAGGCTTCATAGAAATACAGACTTGGGGATGAGGCTCCCCGTTTATGATGGAGGAAAGAATCTTTACACTGCTGGTTTGCTTCCTTTTATACACAAAGAATTCACCATAACATTGACCGAAGAAGATGAGGGTACAGGCAATACCTGGGAACGAGAGTTTAGAGTGAAAATCAAGTTCGTAACTCGTGTTAGCATGCATCAACTACGGGATCTTCTTAGTGGAAAACAAGTGAACACCCCACAAGAAGCACTTAACATCATTGATATTGTATTAAGGGAGCTTGCGGCTCAAAGTTACGTATCAGTTGGAAGGTCTCTCTATTCTGCTGATATAAAAAAACCACAGCAGCTAGGTGGTGGTTTGGAATCATGGCGTGGCTTTTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCGCTTAACATTGACATGTCATCTATGGCGTTTATTGAACCACTCCCTGTCATTGATTTCGTTGCTCAAATTCTGGGTAAAGATGTGCATTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAAGCCTTAAGAGGTGTGAAAGTTGAAGTTACTCATAGAGGAAATGTTCGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCTACAAGAGAGCTTATATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTACTTCCGGGAGATGTATGGCTATAGAATTAAGTATTCTCATCTACCATGCCTGCAAGTAGGGAACGAAAAGAAGGTGAATTATTTGCCAATGGAGGCATGCAAGATTGTTGGGGGCCAGAGATATACAAAAGGGCTAAACGAGAAGCAGATAACTTCTCTGCTTAAAGTTTCATGCCAAAGACCCCGTGAACAAGAGCTAGACATTCTGCAGACGGTTGAACAAAATGATTATGAGAATAACCCCTATGCGAAAGAGTTTGGTATCAGCATAGACGACAAGCTTGCTTCTGTTGAAGCTCGGGTTCTGCCTGCTCCCTGGTTGAAATATCACGATACAGGAAGAGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTTATAAATGGAAGCATAGTAAGATATTGGGCATGTATCAATTTCTCACGTAGCGTTCAAGAAAGCACAGCTCGTGGTTTTTGCCAACAGTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGAGCCAGTAATTCCAATATATACAGCAAGACCAGATCAGGTTAAAAAGGCTTTGAAGTACGTACACTCTGCTGCTTTGGACAAACTTGAGGGGAAAGAGCTGGAATTGCTCATTGCCATTCTTCCTGACAACAACGGCTCTCTGTATGGTGATCTCAAAAGGATTTGTGAAACAGATCTAGGGTTGATTTCTCAGTGCTGCCTCACAAAACACGTCTTCAAGGTTAACAGACAATACCTGGCAAATGTGGCGCTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTGCTTTTGGATGCGTTGAGTTGGAGAATTCCACTTGTTAGTGACATTCCGACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCTGGAGAAGATTCTTCTCCATCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCTGAAGTAACAAAATATGCAGGACTTGTGTGTGCTCAGCCTCATCGTGAAGAACTTATTCAAGACCTTTTCAAGTGTTGGAAAGATCCTCAGCGTGGCATAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTCAGAAGGCAACTGGACAAAAACCATTGAGGATCATATTTTACAGGGATGGGGTAAGCGAAGGACAATTCTACCAGGTTTTGTTGTATGAGCTTGATGCGATCCGCAAGGCTTGTGCATCATTGGAACCTAGTTATCAACCTCCAGTAACATTTGTTGTGGTTCAAAAGCGGCATCACACTAGACTCTTCTCGAGCAATCATGATGACAGAAACAGCACTGACAGGAGTGGCAACATCTTACCTGGGACCGTGGTGGATTCTAAGATCTGTCATCCTACAGAATTTGACTTTTATTTATGCAGTCATGCAGGAATACAGGGCACGAGTAGACCAGCTCACTATCATGTCCTCTGGGACGAGAACAAATTCACTGCAGACGAGATTCAATCTTTAACCAACAACTTATGCTACACGTATGCAAGATGCACGAGATCTGTTTCCGTAGTGCCTCCAGCATACTATGCTCATCTGGCAGCTTACAGAGCTCGATTCTACATGGAACCTGATGTGCATGAGAATGCTAAAGCACGAGGGGCAAGATCAAATGATGGCTCAGTTCGGCCATTGCCAGCTCTGAAAGAGAAGGTGAAGAATGTTATGTTTTACTGTTGA 2730 0.4278 MKDPEEEQVKSRKPMQKHTDRRRRGRRRSHWKPEILKEEGVDLELNPYAASCNSLEFTHRPGYGQLGTKCVVKANHFLADISASDLSHYSVKIAPEVTSRKISKAIIAELVRLHRNTDLGMRLPVYDGGKNLYTAGLLPFIHKEFTITLTEEDEGTGNTWEREFRVKIKFVTRVSMHQLRDLLSGKQVNTPQEALNIIDIVLRELAAQSYVSVGRSLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYRIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVEQNDYENNPYAKEFGISIDDKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSIVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQEPVIPIYTARPDQVKKALKYVHSAALDKLEGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVNRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGIVYGGMIRELLLSFQKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENAKARGARSNDGSVRPLPALKEKVKNVMFYC 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00024 909 FunFam Argonaute 10 442 615 - -
Pral4214g00024 909 SUPERFAMILY Ribonuclease H-like 541 874 IPR012337 -
Pral4214g00024 909 CDD Piwi_ago-like 422 872 IPR045246 -
Pral4214g00024 909 FunFam Protein argonaute-2 257 383 - -
Pral4214g00024 909 ProSiteProfiles PAZ domain profile. 264 378 IPR003100 GO:0005515
Pral4214g00024 909 SMART PAZ_2_a_3 268 400 IPR003100 GO:0005515
Pral4214g00024 909 MobiDBLite consensus disorder prediction 15 30 - -
Pral4214g00024 909 FunFam protein argonaute 10-like 621 909 - -
Pral4214g00024 909 Pfam Mid domain of argonaute 461 538 IPR032473 -
Pral4214g00024 909 SMART Piwi_a_2 552 873 IPR003165 GO:0003676
Pral4214g00024 909 SUPERFAMILY PAZ domain 259 418 IPR036085 GO:0005515
Pral4214g00024 909 Gene3D paz domain 258 382 - -
Pral4214g00024 909 Pfam Piwi domain 553 872 IPR003165 GO:0003676
Pral4214g00024 909 CDD PAZ_argonaute_like 263 377 - -
Pral4214g00024 909 Gene3D - 621 909 IPR036397 GO:0003676
Pral4214g00024 909 ProSiteProfiles Piwi domain profile. 552 873 IPR003165 GO:0003676
Pral4214g00024 909 MobiDBLite consensus disorder prediction 1 31 - -
Pral4214g00024 909 Pfam N-terminal domain of argonaute 68 202 IPR032474 -
Pral4214g00024 909 Pfam Argonaute linker 1 domain 212 261 IPR014811 -
Pral4214g00024 909 Gene3D - 442 615 - -
Pral4214g00024 909 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 56 874 - -
Pral4214g00024 909 Pfam Argonaute linker 2 domain 408 450 IPR032472 -
Pral4214g00024 909 Pfam PAZ domain 268 394 IPR003100 GO:0005515
Pral4214g00024 909 SMART DUF1785_2 211 263 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00024 Pral-Chr4214 184689 196462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00024 57 909 Eukaryotic Initiation Factors Gene Family AT5G43810 75.377 0.0 1402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00024 K11593 - gmx:100810235 1608.96