Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00022 ATGGCTTCGCCGTCTGAACTAAGCCTGGATTGCAAACCCCACAGCTATTCTTTGCTTCTGAAATCATTTGGAGATCAGGCAGATCATACCTACAAGCTTGAGGAGTTCCTTTCTCGGCTTGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTTCTTACCAACGCTATGGAGGCCTCAAGGCAGCAACTTCAAGCCTACAGAGCAGATCAAGGCACGAGACCAGTGCTGGAAGAATTCATACCCATCAAGCAGTCAAACTCAGAAAGCTCTGAGAAGGCATCCAGCATATCAGACAAGGCAAATTGGATGACATCTGCTCAATTATGGAGCCAAGCAAATGAAGGAACCAAGCCCCAGTCCACAATTACATCCCCTAAAGAAGCTGATATTGGCTTCAGTGTAAGCCCCAAGCTCGCTCTTGACAACAAACAGAGGAATGGTGGAGCCTTCCTGCCATTCTCAAAAGAACGAAACTCATGCCAAAGTGGCTCCACATTACGGGTGATCCCCGAGTTGGCCCTCGCCTCTGTTGAGAAAGAAATGGAGGACAAGAAATGCACAGAAACAGAAAATGCAGTGTCATGTCCCAAGAGGGAAAATTCTGGTAAAGCCACAGGAGGCAACGGTACTGGAGTGATCACCGATCAAGGAAAAGGAACTCCAGTTGCGTCTGATCCACAAACAACCAGCACCACCAACACCACTAATCAAACTCATAGGAAGGCAAGAAGATGCTGGTCACCTGACCTGCACCGCCGATTTGTAAATGCTCTTCAGATGCTAGGTGGATCTCAAGTGGCCACCCCAAAGCAGATAAGGGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATACAGGCTTCATACACGACGTCCCAGTCCAAGCCCACAAGCAGCCGGGTCACCCGCACCTCAGCTTGTAGTCCTAGGAGGAATCTGGGTCCCGCCGGAATACGCTTCTGCCGCCGCTCACACTGGCGCACCTGCCATCTACAGCCCACACCCTACCTCCCACCCTCCTCCACCGCCGCACTACTGCACCACAACGCCAGTGCACCAAGAATTCTACGCTGCCGCGGCGGCGCAGCAGCCAACTCCGCCGCACTACCACACGCTGCTCCATCACCATATGCAGATGTACAAAACGAATTCGCACCAGGGCTCGCCGGAATCGGAGATGCGAGGAGGGGGAGAGAGGTCCGAGAGTATAGAGGGCGGGAAGTCAGAGAGCAGCAGCTGGAAGGAAGATAGCGGGGAGAACGAAGGGGAGAGGAAAGGGCTGGCGGCACTGAGGGAAGAAGGAGAAGAGGGTAGTCGGACCGAGACAACTCTGAAATTCTAG 1392 0.5251 MASPSELSLDCKPHSYSLLLKSFGDQADHTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAYRADQGTRPVLEEFIPIKQSNSESSEKASSISDKANWMTSAQLWSQANEGTKPQSTITSPKEADIGFSVSPKLALDNKQRNGGAFLPFSKERNSCQSGSTLRVIPELALASVEKEMEDKKCTETENAVSCPKRENSGKATGGNGTGVITDQGKGTPVASDPQTTSTTNTTNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGSPAPQLVVLGGIWVPPEYASAAAHTGAPAIYSPHPTSHPPPPPHYCTTTPVHQEFYAAAAAQQPTPPHYHTLLHHHMQMYKTNSHQGSPESEMRGGGERSESIEGGKSESSSWKEDSGENEGERKGLAALREEGEEGSRTETTLKF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00022 463 FunFam Myb family transcription factor 249 307 - -
Pral4214g00022 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 307 IPR017930 -
Pral4214g00022 463 SUPERFAMILY Homeodomain-like 247 308 IPR009057 -
Pral4214g00022 463 MobiDBLite consensus disorder prediction 202 250 - -
Pral4214g00022 463 Coils Coil 33 53 - -
Pral4214g00022 463 NCBIfam myb-like DNA-binding domain, SHAQKYF class 250 305 IPR006447 GO:0003677
Pral4214g00022 463 Pfam Myb-like DNA-binding domain 252 303 IPR001005 -
Pral4214g00022 463 MobiDBLite consensus disorder prediction 198 252 - -
Pral4214g00022 463 MobiDBLite consensus disorder prediction 409 463 - -
Pral4214g00022 463 MobiDBLite consensus disorder prediction 399 463 - -
Pral4214g00022 463 Gene3D - 249 307 - -
Pral4214g00022 463 Coils Coil 58 78 - -
Pral4214g00022 463 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 431 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00022 Pral-Chr4214 170527 173261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00022 1 463 G2-like Transcription Factor Family AT2G03500 51.230 4.74e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4214g00022 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00022 - - qsu:112031181 572.392