Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00020 ATGGCGGACCAATTGTACGCTTGGCGTTTGATGATTGTCTTCTTCGTCGCCTCGCTTCTGCTGCTGAGTGTGCGAGTCAGTACGGAGCCGACTCAGGAGAAGCAAGCCCTCCTTGCCTTCATCTCTCAGACCCCACACGCCTCTCGGGTCCGATGGAACGCTTCTGACTCAGCCTGCAACTGGTTTGGCGTCAAATGCGATCCTTCTCGTTCCTTCGTCTTCTCTCTCCGTCTTCCCGGCGTTGGCCTTTTGGGTGGGATTCCTCCCGACACAATCGGTCGTCTCACTCAGCTGCGAGTTCTGAGTCTACGCTCTAATGGTCTTGCCGGCGAGATCCCCGCCGATTTCTCTAATTTGACGTTGCTTCGTAACGTGTACCTCCAGGATAACCAGCTCTCTGGTGGGTTTCCTACTTCTCTGACTCAGTTGGGTCGTTTGACGCGCTTGGATCTCTCGTCCAACAATTTTACGGGTCCAATCCCTTTCTCAATCAACAATTTGACCCACTTGACCGGTCTTTTCTTGCAAAGCAATAGATTCTCGGGCAATCTACCAAGCGTGAGTGCCAAATTGGTAGGCTTCGATGTTTCTAATAATCAGCTTAATGGTTCGATCCCCAAATCTCTCTCCAAGTTCCCTGCATCCTCGTTCACCGGAAACTTAGATCTCTGCGGCGGACCATTGCCGCCATGTAACCCATTCTTCCCGTCTCCGGCTCCGTCGCCTTCCGCCCCGGTCGTGCCCTCTTCCCCAGCTCACAAAAAGTCCAAGAAGCTCTCAAAAGGCGCCATTATCGCAATTGCAGTTGGGTGTTCTGTCGCGGCCTTGTTACTCCTCCTGCTGCTACTTCTGCTGTGCCTCCGCAAACGCCGGCGAAGCCAACCAGCAAAACAGCCCAAGCCCGTGGCGGCAACTCGTGCTGCGCCGGCGGAGGCCGGAACATCGTCTTCAAAAGACGATATCACCGGCGGGTCCGTGGAGGCAGAGAGGAACAAGTTAGTGTTCTTCGAAGGCGGGATATACAGCTTCGATTTGGAAGATCTACTGAGAGCTTCGGCAGAAGTTCTGGGCAAAGGAAGCGTGGGAACATCGTACAAGGCGGTGCTGGAAGAAGGAACCACGGTGGTGGTGAAGAGACTGAAAGACGTGGCCGTAACAAAGAAAGACTTCGATGCTCAAATGGAGGTTCTGGGAAAGATTAAGCACGAGAATGTGGTTCCTCTCAGAGCTTACTATTACTCCAAAGACGAGAAATTGCTCGTCTACGATTACCTCCCATCCGGTAGCTTGTCTGCTCTGCTTCACGGGAGCAGGGGGTCAGGGAGGTCGCCGCTTGACTGGGATAGCCGAATGAGAATAGCGCTGGGTGCTGCCCGGGGTTTGCTTCACCTACACGTGTCGGGAAAAGTGGTCCACGGTAACGTAAAAGCCTCCAACGTACTTCTCCGAGGAGGCGATAATGAGGCCTGCGTTTCGGACTTCGGCCTCAACCCGTTATTCGCCAACACCACGCCCTCGAACCGAGTGGCGGGCTATCGGGCCCCCGAAGTTCTTGAAACGCGGAAAGTCACTTTCAAATCCGACGTGTATAGCCTCGGCGTTTTGTTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGCTGGGCGAGGAGGGGATTGACCTTCCGAGATGGGTTCAGTCGGTGGTCCGAGAAGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGTTGTTGCAGATAGCCATGGCGTGTGTGTCGGTGGTTCCCGATCAGAGACCCACCATGCAGGAGGTGGTACGGATGATGGAGGAGATCAATAGGAGCGAGACGGACGAGGGGTTGCGGCAGTCGTCGGACGATCCGTCGAAGGGATCGGACGGTCAAACGCCGCCGGCCGAGTCAAGGACTCCGCCCAGATCAATCACGCCTTAA 1974 0.5527 MADQLYAWRLMIVFFVASLLLLSVRVSTEPTQEKQALLAFISQTPHASRVRWNASDSACNWFGVKCDPSRSFVFSLRLPGVGLLGGIPPDTIGRLTQLRVLSLRSNGLAGEIPADFSNLTLLRNVYLQDNQLSGGFPTSLTQLGRLTRLDLSSNNFTGPIPFSINNLTHLTGLFLQSNRFSGNLPSVSAKLVGFDVSNNQLNGSIPKSLSKFPASSFTGNLDLCGGPLPPCNPFFPSPAPSPSAPVVPSSPAHKKSKKLSKGAIIAIAVGCSVAALLLLLLLLLLCLRKRRRSQPAKQPKPVAATRAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMEVLGKIKHENVVPLRAYYYSKDEKLLVYDYLPSGSLSALLHGSRGSGRSPLDWDSRMRIALGAARGLLHLHVSGKVVHGNVKASNVLLRGGDNEACVSDFGLNPLFANTTPSNRVAGYRAPEVLETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSKGSDGQTPPAESRTPPRSITP 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00020 657 MobiDBLite consensus disorder prediction 618 633 - -
Pral4214g00020 657 Gene3D Transferase(Phosphotransferase) domain 1 425 639 - -
Pral4214g00020 657 SUPERFAMILY Protein kinase-like (PK-like) 354 617 IPR011009 -
Pral4214g00020 657 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Pral4214g00020 657 ProSiteProfiles Protein kinase domain profile. 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4214g00020 657 PANTHER OS05G0588300 PROTEIN 13 629 - -
Pral4214g00020 657 Gene3D Ribonuclease Inhibitor 189 234 IPR032675 -
Pral4214g00020 657 MobiDBLite consensus disorder prediction 634 657 - -
Pral4214g00020 657 Pfam Leucine Rich Repeat 97 119 IPR001611 GO:0005515
Pral4214g00020 657 SUPERFAMILY L domain-like 40 215 - -
Pral4214g00020 657 MobiDBLite consensus disorder prediction 295 323 - -
Pral4214g00020 657 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 425 630 - -
Pral4214g00020 657 Gene3D Phosphorylase Kinase; domain 1 318 424 - -
Pral4214g00020 657 MobiDBLite consensus disorder prediction 618 657 - -
Pral4214g00020 657 FunFam pollen receptor-like kinase 1 320 424 - -
Pral4214g00020 657 Pfam Protein kinase domain 353 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4214g00020 657 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Pral4214g00020 657 FunFam Probable inactive receptor kinase RLK902 30 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00020 Pral-Chr4214 150810 154160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00020 33 640 Receptor kinase-like Gene Family AT5G58300 54.383 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4214g00020 Pkinase 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00020 - - qsa:O6P43_023032 946.421