Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00005 ATGTCATCATCAAGTGGAATCGTTTGGAGCTATGAAGAAGAAAAAGCGTTTGAGAATGCCATCGCAATGCATTGGGTTGAAGAGGACTCAAAAGAACACTGGGAGAAGATTGCATCAGCTGTTCCCAGCAAAAGCATGGAGGAGTTGAAGCAACATTACAGATTGTTATTAGAAGATGTGAGTGCAATAGAGGCAGGCCATATTCCACTTCCAAACTATACTGGTGGAGAAGAAGCTACTTCTTCAAGTAAGGAATTGCATGCTTCTTCCTCCAAGGCTTCCACCTCAGATAAAAGATCTAATTGTAATTTCAGAAGTGGGTTTTCCGGGGTGGGACATGAGTCATCTGGGCATGCTGGTAAAGGAGGCTCCTCAAAATCCTCAGAACAAGAAAGGCGAAAAGGAATTCCCTGGACAGAAGAAGAGCATAGGCTATTTCTGCTTGGCCTTGACAAATTTGGAAAGGGAGATTGGAGGAGCATATCAAGGAACTTTGTGATGTCAAGGACCCCAACTCAAGTGGCAAGCCACGCACAGAAGTACTTTATTAGGTTGAACTCCATGAATAGGGATAGGAGAAGGTCAAGCATCCATGACATAACAAGTGTGAACAATGGGGATGTGGCAACTAACCAGGCGCCAATAACAGGCCAGCACGCAAACACAAACCCATCAAGCACAATGGGTGTGGCACAATCTATGAAGCATAGGCCTCATCAACCTCATATACCTGCTGGAATTGGCATGTATGGAGCACCAGTAGGGCACCCTGTTGCTGCTCCTCCAAGTCATATGGCTTCTGCTGTAGGGACCCCTGTGATGATGCCTCCCGGACCTCATCCTCATCCTCCTTATGTTGTTCCAATGGCTTACCCAATGGCATCTCCAACAATGCACAGATGA 903 0.4618 MSSSSGIVWSYEEEKAFENAIAMHWVEEDSKEHWEKIASAVPSKSMEELKQHYRLLLEDVSAIEAGHIPLPNYTGGEEATSSSKELHASSSKASTSDKRSNCNFRSGFSGVGHESSGHAGKGGSSKSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVMSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVATNQAPITGQHANTNPSSTMGVAQSMKHRPHQPHIPAGIGMYGAPVGHPVAAPPSHMASAVGTPVMMPPGPHPHPPYVVPMAYPMASPTMHR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00005 300 CDD SANT 9 57 IPR001005 -
Pral4214g00005 300 CDD SANT 137 182 IPR001005 -
Pral4214g00005 300 ProSiteProfiles SANT domain profile. 8 61 IPR017884 -
Pral4214g00005 300 Gene3D - 2 70 - -
Pral4214g00005 300 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Pral4214g00005 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 184 IPR006447 GO:0003677
Pral4214g00005 300 MobiDBLite consensus disorder prediction 75 110 - -
Pral4214g00005 300 SUPERFAMILY Homeodomain-like 132 187 IPR009057 -
Pral4214g00005 300 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Pral4214g00005 300 SMART sant 5 59 IPR001005 -
Pral4214g00005 300 SMART sant 134 184 IPR001005 -
Pral4214g00005 300 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Pral4214g00005 300 FunFam Transcription factor SRM1 1 70 - -
Pral4214g00005 300 Gene3D - 136 188 - -
Pral4214g00005 300 MobiDBLite consensus disorder prediction 73 137 - -
Pral4214g00005 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 186 IPR017930 -
Pral4214g00005 300 PANTHER TRANSCRIPTION FACTOR KUA1 5 296 - -
Pral4214g00005 300 FunFam transcription factor MYB1R1 136 187 - -
Pral4214g00005 300 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Pral4214g00005 300 Pfam Myb-like DNA-binding domain 9 57 IPR001005 -
Pral4214g00005 300 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00005 Pral-Chr4214 66703 68246 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4214g00005 Myb_DNA-binding 4.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00005 - - pcin:129320426 471.47