Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00004 ATGCATTGGGTTGAAGAGGACTCAAAAGAACACTGGGAGAAGATTGCATCAGCTGTTCCCAGCAAAAGCATGGAGGAGTTGAAGCAACATTACAGATTGTTATTAGAAGATGTGAGTGCAATAGAGGCAGGCCATATTCCACTTCCAAACTATACTGGTGGAGAAGAAGCTACTTCTTCAAGTAAGGAATTGCATGCTTCTTCCTCCAAGGCTTCCACCTCAGATAAAAGATCTAATTGTAATTTCAGAAGTGGGTTTTCCGGGGTGGGACATGAGTCATCTGGGCATGCTGGTAAAGGAGGCTCCTCAAAATCCTCAGAACAAGAAAGGCGAAAAGGAATTCCCTGGACAGAAGAAGAGCATAGGCTATTTCTGCTTGGCCTTGACAAATTTGGAAAGGGAGATTGGAGGAGCATATCAAGGAACTTTGTGATGTCAAGGACCCCAACTCAAGTGGCAAGCCACGCACAGAAGTACTTTATTAGGTTGAACTCCATGAATAGGGATAGGAGAAGGTCAAGCATCCATGACATAACAAGTGTGAACAATGGGGATGTGGCAACTAACCAGGCGCCAATAACAGGCCAGCACGCAAACACAAACCCATCAAGCACAATGGGTGTGGCACAATCTATGAAGCATAGGCCTCATCAACCTCATATACCTGCTGGAATTGGCATGTATGGAGCACCAGTAGGGCACCCTGTTGCTGCTCCTCCAAGTCATATGGCTTCTGCTGTAGGGACCCCTGTGATGATGCCTCCCGGACCTCATCCTCATCCTCCTTATGTTGTTCCAATGGCTTACCCAATGGCATCTCCAACAATGCACAGATGA 837 0.4659 MHWVEEDSKEHWEKIASAVPSKSMEELKQHYRLLLEDVSAIEAGHIPLPNYTGGEEATSSSKELHASSSKASTSDKRSNCNFRSGFSGVGHESSGHAGKGGSSKSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVMSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVATNQAPITGQHANTNPSSTMGVAQSMKHRPHQPHIPAGIGMYGAPVGHPVAAPPSHMASAVGTPVMMPPGPHPHPPYVVPMAYPMASPTMHR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00004 278 CDD SANT 3 35 IPR001005 -
Pral4214g00004 278 Gene3D - 2 48 - -
Pral4214g00004 278 SUPERFAMILY Homeodomain-like 110 165 IPR009057 -
Pral4214g00004 278 ProSiteProfiles SANT domain profile. 116 164 IPR017884 -
Pral4214g00004 278 FunFam transcription factor MYB1R1 114 165 - -
Pral4214g00004 278 MobiDBLite consensus disorder prediction 45 115 - -
Pral4214g00004 278 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 162 IPR006447 GO:0003677
Pral4214g00004 278 CDD SANT 115 160 IPR001005 -
Pral4214g00004 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 164 IPR017930 -
Pral4214g00004 278 Pfam Myb-like DNA-binding domain 115 160 IPR001005 -
Pral4214g00004 278 Gene3D - 114 166 - -
Pral4214g00004 278 MobiDBLite consensus disorder prediction 53 88 - -
Pral4214g00004 278 ProSiteProfiles Myb-like domain profile. 108 160 IPR001005 -
Pral4214g00004 278 PANTHER TRANSCRIPTION FACTOR KUA1 9 274 - -
Pral4214g00004 278 MobiDBLite consensus disorder prediction 1 16 - -
Pral4214g00004 278 MobiDBLite consensus disorder prediction 1 23 - -
Pral4214g00004 278 SMART sant 112 162 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00004 Pral-Chr4214 47549 68246 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4214g00004 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00004 - - pcin:129320426 431.024