Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4214g00003 ATGTTTCCTTCGAACCCTTTTCCCTTCGACAGCAACCTAAGCTCCACGCAACATAACTTTCCTGCTCCTCCTGCTCCTCTTCCTTTCTCCTTTCTTCACTTCCCTCCGCCTTCCTTTGAAGACAACGAAATCTTCCTCCCTCAACAACCAAACCATCATCATGACCACCTCTTGCTTCATCATCAATCACAACCTCCAGCTGAATCAGGTAGTGCCAGCATGGAGGTTTCGAACAAGAATGAGCAGATCCCGGTAAGGAATAAGAGGATTTGCAAGAGAGATAGGCACAGCAAGATCAAGACGGCTAGAGGGCTAAGAGATCGGAGAATGAGACTTTCTCTGGAAGTAGCCAAGAGATTCTTTGGTCTCCAAGACATCCTAGGCTTTGACAAGGCCAGCAAAACCGTTGAGTGGCTGCTGAATCAGTCAAAGGACGAGATCAAACAGCTAGCAATGGACAAGAATTACAATAATTGCTGTGGGAATGGTGGGGTGAAGAGTGCTTCTTCAACTTCAGAGTGTGAAGGGGTGTCAGGTTTGGACGAGGTGGCGTTAAGCGGGATGAATCAAGAGCAAGAGGGAGAACGTTCCCTACTGGTAAAGAGACGGACAAAAAATGCAAGAAAGAGTGCACTATTGGATCCTCTAGTTGCAAGGGAGTCAAGGGAAAAGGCTAGAGAGAGGGCAAGAGAGAGGACCAAACAGAAGCAGAAGATGAAGATGAAAAGTCGCAAATCATTGCCAGCAGCTGATGACACAACCAACAATAATGGTAACCTC 780 0.4705 MFPSNPFPFDSNLSSTQHNFPAPPAPLPFSFLHFPPPSFEDNEIFLPQQPNHHHDHLLLHHQSQPPAESGSASMEVSNKNEQIPVRNKRICKRDRHSKIKTARGLRDRRMRLSLEVAKRFFGLQDILGFDKASKTVEWLLNQSKDEIKQLAMDKNYNNCCGNGGVKSASSTSECEGVSGLDEVALSGMNQEQEGERSLLVKRRTKNARKSALLDPLVARESREKARERARERTKQKQKMKMKSRKSLPAADDTTNNNGNL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4214g00003 260 ProSiteProfiles TCP domain profile. 92 150 IPR017887 -
Pral4214g00003 260 MobiDBLite consensus disorder prediction 64 82 - -
Pral4214g00003 260 ProSiteProfiles R domain profile. 219 236 IPR017888 -
Pral4214g00003 260 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 66 243 IPR005333 GO:0003700
Pral4214g00003 260 Coils Coil 222 242 - -
Pral4214g00003 260 Pfam TCP family transcription factor 92 240 IPR017887 -
Pral4214g00003 260 MobiDBLite consensus disorder prediction 210 260 - -
Pral4214g00003 260 MobiDBLite consensus disorder prediction 215 234 - -
Pral4214g00003 260 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4214g00003 Pral-Chr4214 46933 47712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4214g00003 26 247 TCP Transcription Factor Family AT3G18550 37.647 2.80e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4214g00003 TCP 3.9e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4214g00003 - - qsa:O6P43_023000 188.734