Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00090 ATGGATTCGATGGACATCGTGGGGAAATCAAAGGAAGACGCTTCCCTTCCTAAAGCAACTATGACAAAAATTATTAAAGAGATGCTACCCCCTGATGTACGTGTCGCAAGAGATGCACAAGATCTATTGATTGAATGCTGTGTAGAGTTCATAAACCTTGTATCATCAGAGTCCAATGATGTCTGTAATAGAGAGGATAAACGGACAATTGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGATTTAGTGAGTACATTGAGGAAGTTTACGCAGCATATGAGCAGCATAGGATTGAGACCATGCAGGACTCTTTAAGAGCTGGCAAGTTGAGTAATGGAGCCGATATGACTGAGGAGGAAGCATTGCTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGGATGAACGGTGGGGCCGTTGCTTCCAAGCAGCCAGATGCTGACCAAACTTTAGATAGCTAA 471 0.4459 MDSMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNREDKRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHRIETMQDSLRAGKLSNGADMTEEEALLEQQRMFAEARARMNGGAVASKQPDADQTLDS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00090 156 FunFam Negative cofactor 2 beta 6 143 - -
Pral4212g00090 156 MobiDBLite consensus disorder prediction 137 156 - -
Pral4212g00090 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Pral4212g00090 156 Gene3D Histone, subunit A 4 144 IPR009072 GO:0046982
Pral4212g00090 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Pral4212g00090 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00090 Pral-Chr4212 451995 455943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00090 1 153 CCAAT-DR1 Transcription Factor Family AT5G23090 84.967 2.05e-93 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral4212g00090 CBFD_NFYB_HMF 7.7e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00090 K21751 - gmx:100807912 283.108