Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00085 ATGGCTGGTCGTAGAAGAAAGAGGCCTAACTTTAGCAGAATCCATGCCTTTTCATGTGGGAAAGCGTCGTTCATTGGGGAGCATTCACTGATTGGAGGGCCTGGGTTTTCAAGAATAGTATATTGCAACGATCCAGAACGAGCTGAGGCTAGTCTTATCAATTATGGTGATAACTACGTCAGAACAACCAAGTACACTTTGGTTTCGTTTCTTCCCAAGTCATTGTTTGAGCAATTTAGAAGAGTTGCCAATTTCTTTTTCCTCTTATCTGCAATCCTGGCTTTCTTCCCTGTCACTCCTTGGGAGTCACCTTTCAGCTCCATTTTTCCTCTTACGTTTGTGGTTGCTCTTACAATGGGGAAAGAGATTATTGAGGATTGGAGGAGGAGGAAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATCGTGGAGGAGGTTTTGATTCTGCAAAATGGAGGGATCTAAAAGTTGGGGACGTAGTAAAGGTTGAGAAAGATGAATTCTTTCCCGCTGATCTCATCTTACTTTCATCAAGCTACGATGATGCAATTTGCTATGTGGAGACCACGAATCTTGATGGAGAAACAAACCTTAAACTGAAACAAGCATCGGAAGAAACTTCAAAATTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCCACTATCGCATGTGAAGATCCAAATGCAAATTTGTACTCGTTTATAGGATCTATGGAGCTGGAGGGTCAACAGTACCCTCTCACACCTCAGCAACTTTTGCTTAGGGACTCTAAGCTGAGGAACACGGATTTTATTTATGGTGTGGTAATCTTTACCGGTCACGATACAAAGGTTGTGCAGAACTCAACAGAGCCTCCTTCAAAGAGAAGCAACATTGAAAGACGGATGGACAATATTGTCTACCTCTTATTCGGTTTATTGTTCATGATTTCTTTTGTTGGGTCTGTTTTCTTTGGGATTTATACAAGTGAAGACATTGAAAACGGTAAAATGACAAGATGGTACCTTAGACCAGATGATACTTCGATTTTTTATGATCCTAATAGAGCAGCAGTTGCAGCAATGTTGCATTTCTTAACTTTCCTTATGTTGTATGGTTACTTCATTCCCATTTCCCTGTATGTGTCAATAGAAATTGTGAAAATTCTTCAGAGCTTTTTCATCAACCAGGACTTGCACATGTATTATGAGGAAACTGACAAGCCAGCACGTGCTCGTACCTCAAATTTGAACGAAGAACTTGGCCAAGTTCATACCATACTTTCTGACAAAACAGGAACTTTGACTTGTAACTCCATGGAATTTATCAAATGTTCCATTGCTGGGGTTGCTTATGGACAAGGTGTTACAGAAGTCGAGAGAGCTCTAGCAAGAAGGAAAGGGTCACCGCGAGAACAAGTGTCAGTAGAAAAAGATGACAATGTTGCACAGATTGCTGTAGCAAAGCCACCTGTTAAAGGGTTTAACTTTCTAGATGAAAGGATCATGAATGGGAATTGGGTTAACGAGCCTCATGCGAAAGTAATCCAAAACTTCTTAAGATTGCTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAAGTTTCATATGAAGCTGAATCACCGGATGAGGCAGCATTTGTGATTGCTGCTAGAGAACTTGGGTTTGAGTTCTATGAAAGGACACAGACGACCATTTTACTGCATGAGTTTGATCCTCTATCTGGCAGGAAGGTTGAAAGATCCTACAAACTTCTAAACGTAATAGAGTTTAGCAGTGCAAGAAAGCGGATGTCTGTAATTGTAAGAGATGAGGACGGGAATCTGCTGTTACTTTCCAAAGGAGCTGACAGTGTCATGTTTGAAAGACTTTCAAAGAATGGAAGAGAGTTTGAAGAGAAAACTCGGGAGCACATTAATGAGTATGCTGATGCTGGTCTGAGGACATTGATACTTGCGTATCGTGAACTTGATGAGGAAGAGTACAACCGATTTAACAGAGAATTCACGGAGGCCAAGAGCATAGTGAGTGCAGATCGAGAGCAGATTGTAGAAGAAATAGCAGAACAGATTGAGAAGGATTTAATTCTTCTTGGGGCTACTGCCGTTGAAGACAAACTTCAAAATGGGGTTCCAGAATGCATCGACAAGCTTGCACAGGCTGGAATTAAGCTCTGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGATTTGCTTGTAGCTTACTAAGGCAAGGAATGAAACAAATTATAATTAGTTCCGAAACTCCAGAAATCAAATCACTGGAGAAATTGGAGGACAAGTCTGCTGCTGCTGAGGCAATCAAGGCAAGTGTTCTTCATCAGATACAGGAGGGGAAGGCGTCATTATCTACATCAGATGAAAATCCCGAGGCATTTGCTCTGATCATTGATGGGAAGTCTCTCACTTATGCATTGGAAGATGATGTGAAGGACTCGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTCATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACGAGGCTAGTTAAGACTAAAACTGCTAGGACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGGATGCTCCAAGAAGCTGACATTGGAATTGGTATCAGTGGTGCTGAGGGAATGCAGGCTGTTATGTCAAGTGACATTGCCATTGCCCAATTTCGGTTCTTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCCATGGTCTGTTACTTCTTCTACAAGAACATTACTTTTGGCTTCACCCTCTTCTTCTTTGAGATATATGCATCATTCTCCGGACAACCAGTATATAATGATTGGTATTTATCACTGTATAACGTACTCTTCACGTCACTTCCGGTGATCGCCTTAGGTGTGCTTGACCAAGATGTCTCTGCAGAATTCTGTCTCAAGTTTCCATTGTTATACCAAGAAGGCGTGCAAAATAGCCTGTTCAGATGGACCAGGATACTCAGTTGGCAATTCAACGGTTTGCTAAGTGCCACTCTGATATTCTTCCTCTGCATCAGTGCACTGGAAAGTCAAGCCTTCCGAAAAAGCGGCGAAGTTGTCGGGCTAGAAATCCTTGGAGCCGCCATTTACACTTGTGTAGTGTGGGTGGTGAATTGCCAAATGGCAGTATCAATCAATTACTTCACTTTCATACACCATATTTTCATCTGGGGTAGCATTCTTTTCTGGTATTTATTCCTTCTTGCCTATGGAGCCATGGATCCTACCATATCTACCACTGCTTATAAGGTCTTCATTGAAGCTTGTGCGCCTGCCCCTTCCTACTGGCTCGTCACTTTGCTTGTTGTTGTTGCATGCCTCATTCCATATTTCGCCTGTGCTTCGATAAAGATGAGGTTTTTCCCTTCATACCATCAAATGATACATTGGATCAATAAGGATGGCCGAGTAAATGATCCAGAATATTGTAGTGTGGTACGGTCTAGATCTATACGCCACACGACCGTGGGCTTCACAGCTCGGTTTGAGGCATCTAAACGGTTTGAAGATAACTCTGAGAGCATCCCTTAA 3588 0.4197 MAGRRRKRPNFSRIHAFSCGKASFIGEHSLIGGPGFSRIVYCNDPERAEASLINYGDNYVRTTKYTLVSFLPKSLFEQFRRVANFFFLLSAILAFFPVTPWESPFSSIFPLTFVVALTMGKEIIEDWRRRKQDIEMNNRKVKVHRGGGFDSAKWRDLKVGDVVKVEKDEFFPADLILLSSSYDDAICYVETTNLDGETNLKLKQASEETSKLQEDSSFQNFKATIACEDPNANLYSFIGSMELEGQQYPLTPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVVQNSTEPPSKRSNIERRMDNIVYLLFGLLFMISFVGSVFFGIYTSEDIENGKMTRWYLRPDDTSIFYDPNRAAVAAMLHFLTFLMLYGYFIPISLYVSIEIVKILQSFFINQDLHMYYEETDKPARARTSNLNEELGQVHTILSDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVERALARRKGSPREQVSVEKDDNVAQIAVAKPPVKGFNFLDERIMNGNWVNEPHAKVIQNFLRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTQTTILLHEFDPLSGRKVERSYKLLNVIEFSSARKRMSVIVRDEDGNLLLLSKGADSVMFERLSKNGREFEEKTREHINEYADAGLRTLILAYRELDEEEYNRFNREFTEAKSIVSADREQIVEEIAEQIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKLEDKSAAAEAIKASVLHQIQEGKASLSTSDENPEAFALIIDGKSLTYALEDDVKDSFLELAIGCASVICCRSSPKQKALVTRLVKTKTARTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCYFFYKNITFGFTLFFFEIYASFSGQPVYNDWYLSLYNVLFTSLPVIALGVLDQDVSAEFCLKFPLLYQEGVQNSLFRWTRILSWQFNGLLSATLIFFLCISALESQAFRKSGEVVGLEILGAAIYTCVVWVVNCQMAVSINYFTFIHHIFIWGSILFWYLFLLAYGAMDPTISTTAYKVFIEACAPAPSYWLVTLLVVVACLIPYFACASIKMRFFPSYHQMIHWINKDGRVNDPEYCSVVRSRSIRHTTVGFTARFEASKRFEDNSESIP 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00085 1195 CDD P-type_ATPase_APLT_Dnf-like 57 1023 - -
Pral4212g00085 1195 Gene3D - 700 903 IPR023214 -
Pral4212g00085 1195 FunFam Phospholipid-transporting ATPase 541 699 - -
Pral4212g00085 1195 SFLD p-type atpase 408 914 IPR044492 -
Pral4212g00085 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 701 IPR023299 GO:0000166
Pral4212g00085 1195 Gene3D - 118 286 - -
Pral4212g00085 1195 NCBIfam HAD-IC family P-type ATPase 829 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4212g00085 1195 NCBIfam HAD-IC family P-type ATPase 106 209 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4212g00085 1195 Gene3D - 544 699 IPR023299 GO:0000166
Pral4212g00085 1195 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral4212g00085 1195 SUPERFAMILY HAD-like 419 918 IPR036412 -
Pral4212g00085 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1141 IPR023298 -
Pral4212g00085 1195 Pfam Cation transport ATPase (P-type) 522 626 - -
Pral4212g00085 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1152 - -
Pral4212g00085 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1142 IPR032630 -
Pral4212g00085 1195 SUPERFAMILY Calcium ATPase, transduction domain A 138 283 IPR008250 -
Pral4212g00085 1195 Pfam E1-E2 ATPase 136 326 - -
Pral4212g00085 1195 FunFam Phospholipid-transporting ATPase 699 903 - -
Pral4212g00085 1195 FunFam Phospholipid-transporting ATPase 117 286 - -
Pral4212g00085 1195 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Pral4212g00085 1195 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pral4212g00085 1195 Pfam Phospholipid-translocating ATPase N-terminal 40 101 IPR032631 -
Pral4212g00085 1195 SFLD Haloacid Dehalogenase 408 914 - -
Pral4212g00085 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00085 Pral-Chr4212 429645 435600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00085 10 1186 Primary Pumps ATPases AT1G68710 70.008 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00085 K01530 - gmx:100797039 1939.08