Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00077 ATGGGGAGCGATGGTGAAGCCGAGAAGTCGGCGCAGAAGGAGAAGAAGAAGATGCTAGGCCTGTCTCCGATTGCCAAACCTCTGGCTGGGAAGAAGCTCTGCAAGCGAACTCTTAAACTTGTTCGTCGAGCTTCTGAACACAAGTGCTTAAAGAGAGGAGTAAAGGAAGTGGTTAAAAGTATAAGGCGTGGTCATAAAGGATTATGTGTTATAGCTGGCAATATTTCGCCGATTGATGTGATCACTCATCTTCCTATCTTATGTGAAGAAGCTGAAATCCCATACATATATGTCCCATCGAAAGAAGACCTTGCAAGTGCAGGAGTGACTAAGAGGCCAACTTGTTGCGTTTTAGTGATGACCAAGCCTGCTAAGGGGGAATTAGATAAAGGGGAACAAGAAAAACTGAAGTCAGATTATGATCAAGTTGTATCGGAAGTTAATGAAGTTACTGCTTCTCTTTTTTGA 468 0.4338 MGSDGEAEKSAQKEKKKMLGLSPIAKPLAGKKLCKRTLKLVRRASEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHLPILCEEAEIPYIYVPSKEDLASAGVTKRPTCCVLVMTKPAKGELDKGEQEKLKSDYDQVVSEVNEVTASLF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00077 155 PRINTS Ribosomal protein L7A/RS6 family signature 69 82 IPR018492 -
Pral4212g00077 155 PRINTS Ribosomal protein L7A/RS6 family signature 85 95 IPR018492 -
Pral4212g00077 155 PRINTS Ribosomal protein L7A/RS6 family signature 50 64 IPR018492 -
Pral4212g00077 155 PRINTS Ribosomal protein L7A/RS6 family signature 95 109 IPR018492 -
Pral4212g00077 155 FunFam H/ACA ribonucleoprotein complex subunit NHP2 18 150 - -
Pral4212g00077 155 SUPERFAMILY L30e-like 19 129 IPR029064 -
Pral4212g00077 155 PRINTS High mobility group-like nuclear protein signature 23 36 IPR002415 GO:0003723|GO:0005730
Pral4212g00077 155 PRINTS High mobility group-like nuclear protein signature 97 109 IPR002415 GO:0003723|GO:0005730
Pral4212g00077 155 PRINTS High mobility group-like nuclear protein signature 36 51 IPR002415 GO:0003723|GO:0005730
Pral4212g00077 155 PRINTS High mobility group-like nuclear protein signature 53 63 IPR002415 GO:0003723|GO:0005730
Pral4212g00077 155 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 38 121 IPR004038 -
Pral4212g00077 155 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 14 145 - -
Pral4212g00077 155 Gene3D - 15 151 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00077 Pral-Chr4212 385290 386940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00077 50 122 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 32.877 3.89e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00077 K11129 - gmx:100305515 270.781