Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00071 ATGATGAACAGCCCAACAGATCATCAAGAGAAGGGGCAGTTAGTGGCGAAGAGAAGAAAATACACCAACACAGAAGCTTCCAGAGCTCCAAGGCGACGATTCTGCAGCAGCAGCAACAAGAAGAATGAAGGAGGAGGGGTGTCGACGACGTTGAAGTTGTACGAAGATCCATGGAAGATCAAGAAGACCCTGACGGAGAGCGACCTGGGAATCTCGAGCCGTCTGCTGCTGGCCACAGATTTGGTGAAGAGCCAGATCCTTCCTATGCTCGGGCTCGATCATGCACGAGCCGCCGACTCCGACGAAGGCACCTCCGTTAGTGTTTGGGACTTGGATTCCAAATCCATGCACCACCTCGTCCTCAAGCGGTGGCCTTCCTCGAAGAGCTATGTTTTCATTGGCAAGTGGAACCAGGATTTCGTCAGGAGGAGGGAGCTCAAGAAAGGGGACGAGATTGGGTTTCAGTGGGATCCTTATAACTCCCTTTTCAACTTCTGCGTTCTTAAACGGGCTTAA 516 0.5194 MMNSPTDHQEKGQLVAKRRKYTNTEASRAPRRRFCSSSNKKNEGGGVSTTLKLYEDPWKIKKTLTESDLGISSRLLLATDLVKSQILPMLGLDHARAADSDEGTSVSVWDLDSKSMHHLVLKRWPSSKSYVFIGKWNQDFVRRRELKKGDEIGFQWDPYNSLFNFCVLKRA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00071 171 SUPERFAMILY DNA-binding pseudobarrel domain 57 166 IPR015300 -
Pral4212g00071 171 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 31 170 - -
Pral4212g00071 171 MobiDBLite consensus disorder prediction 11 27 - -
Pral4212g00071 171 CDD B3_DNA 58 169 IPR003340 GO:0003677
Pral4212g00071 171 Gene3D - 56 170 IPR015300 -
Pral4212g00071 171 MobiDBLite consensus disorder prediction 1 46 - -
Pral4212g00071 171 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00071 Pral-Chr4212 363022 363822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00071 7 155 B3 DNA Binding Superfamily AT1G25560 25.000 1.75e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00071 - - pvu:PHAVU_009G204600g 251.521