Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00060 ATGGAGCTCCCTCAGGCGCGTTCCTTCGGAACCGAAGCAAGAAAACCGACCCATGACTTTCTCTCACTGTACAGTCATTCAACTGCCCAACAAGATCCGAGGCCACCATCTCAAGGAAGTTACCTGAAAACGCATGACTTCTTGCAGCCACTAGAACGTTTTGAGAAGAAAGCAAACGCCAAGGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGTCACCACCTCCTGCACCGCCGCCGCCGCCGCCATGTGTTGAGCACATCCTTCCTGGAGGCATTGGGACTTACAGTATCAGCCACGTCTCGTATTTTAGTGATCCCAGGGTTCCAAAGCCGGAGGCTTCCTTTTTCAGTGTGTCTCCTTGTGAAGCAAGTACAGATAGAAATGAGGAGAACTCAAACTGCAGTTCATATACTGGAAGTGGTTTCGCTTTGTGGGAAGAGTCTGCCGTTAAGAAGGGAAAGACAGGGAAGGAGAATAACGTGGGAGATAAACCCGTTATATCAGCCAAGACAGGGCAGTGGTCGCTGACTGAGAGAGCATGTCAGTCATTTGTTAAGAATAGTCAGCATAGCTTCAATTCTGTCACTTCCACTCAGAAAACTGGGCAGAAAAACCAGAGTTTTATTGATATGATAAAGTCCGCCAAGGATTGCTCTCAGGATGAGGAGCCAGACAATGAAGAAGCATTCATTTTTAAGAAAGAATCTTCAAATACCCAGAGAGGCGAATTGAGAGTGAAAGTGGATGGAAAGAGTTCTGACCAAAGGCCAAACACACCACGATCAAAACATTCTGAAACAGAACAGCGAAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGAGAGATTATTCCACACAGTGACCAGAAAAGAGACAAGGCATCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTACAAGAAAAGGTTCATAAGCACGAAGATTCATACCAAGTTTGGAATCAAGAGAGAGAGAAATTGACCCCAAGGAAGAACAATCACAGGCCTTCAGAAAGCTATGATGATCCATCTCGTGTAATAAATAGTGGGTCAGGTCCTTCTTCAATGGTACTGTTTCCTTCAAAGAGGGAGGAGGAAAATTTTAGTATCTCCCCAACAATTACTGGGGGCACAAAGAACGTAGATGCTGGCACTAGTTCTGCAACTACAGTGAGGGCAATGAATCAACATCCTGGAATAACCAATAAGGCCATGCCAATTCCTAACCCTTCACAGCCAAATTTCTTCAATCCTAGCCACAGTGGCGGCCCAGGTAGATTGGTGTCTCAGCCCACACACAGGCTAGCCTCAGATGCTGAAAACATCGTGTATAATCCCTTAGGACAATCTCAGACTTACTCTTCTGCTACAGGGGTGACTGCTGCTAGTGATAAGCTTAAAGAGAAAGAGCTCACTATTGAAAGCGGTGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAACATCTCCGTGCAAATTGAGCTTGGCAAGCGAGCAAACATCAGACCAATTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGCAACCAAGGGATGAAGCGCTCTAAAGTTTGTAGCGTAGAGGAGACTGACCTAGCAGTAAAGAAGCTAAAGACAAGCAGAAGCTGA 1710 0.4503 MELPQARSFGTEARKPTHDFLSLYSHSTAQQDPRPPSQGSYLKTHDFLQPLERFEKKANAKEEASDEISSVVQKSPPPAPPPPPPCVEHILPGGIGTYSISHVSYFSDPRVPKPEASFFSVSPCEASTDRNEENSNCSSYTGSGFALWEESAVKKGKTGKENNVGDKPVISAKTGQWSLTERACQSFVKNSQHSFNSVTSTQKTGQKNQSFIDMIKSAKDCSQDEEPDNEEAFIFKKESSNTQRGELRVKVDGKSSDQRPNTPRSKHSETEQRRRSKINDRFQMLREIIPHSDQKRDKASFLLEVIEYIQFLQEKVHKHEDSYQVWNQEREKLTPRKNNHRPSESYDDPSRVINSGSGPSSMVLFPSKREEENFSISPTITGGTKNVDAGTSSATTVRAMNQHPGITNKAMPIPNPSQPNFFNPSHSGGPGRLVSQPTHRLASDAENIVYNPLGQSQTYSSATGVTAASDKLKEKELTIESGAISISSVYSKGLLDSLTQALKNSGVDLSQANISVQIELGKRANIRPIGPTSGVKDEVTSSNQGMKRSKVCSVEETDLAVKKLKTSRS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00060 569 MobiDBLite consensus disorder prediction 329 359 - -
Pral4212g00060 569 CDD bHLH_AtBIM_like 261 335 - -
Pral4212g00060 569 MobiDBLite consensus disorder prediction 1 86 - -
Pral4212g00060 569 MobiDBLite consensus disorder prediction 21 44 - -
Pral4212g00060 569 MobiDBLite consensus disorder prediction 527 548 - -
Pral4212g00060 569 Gene3D - 260 337 IPR036638 GO:0046983
Pral4212g00060 569 MobiDBLite consensus disorder prediction 48 68 - -
Pral4212g00060 569 SMART finulus 268 318 IPR011598 GO:0046983
Pral4212g00060 569 MobiDBLite consensus disorder prediction 234 281 - -
Pral4212g00060 569 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 567 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pral4212g00060 569 Coils Coil 309 329 - -
Pral4212g00060 569 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 262 312 IPR011598 GO:0046983
Pral4212g00060 569 Pfam Helix-loop-helix DNA-binding domain 264 313 IPR011598 GO:0046983
Pral4212g00060 569 MobiDBLite consensus disorder prediction 329 347 - -
Pral4212g00060 569 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 260 332 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00060 Pral-Chr4212 311056 317473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00060 1 524 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 47.464 8.83e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4212g00060 HLH 2.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00060 - - adu:107468970 674.47