Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00046 ATGGGATTTGATAACGTTAAAGAGCTGAAGCTCGTCGCCTTAATTGCTCTGTGTTTTGTTGTAATCTCGCCGGCGGTGGCATATGATCCTTTGGATCCAACTGGGAACGTGACCATAAGATGGGATATTATGTCCTGGACTTCAGATGGATATTTGGCTACAGTGACGATATTCAACTTTCAGTTGTACCGTAATATCATGAACCCAGGATGGACATTAGGGTGGACATGGGCGAAAAAAGAGATAATATGGACAATGATGGGAGCACAGGCTACAGAACAAGGAGATTGTTCTAAGTTTAAGTTAAAAATTCCACATAGTTGCAAGAGAAATCCTCAAGTGGTGGATTTGCTTCCAGGGGCTCCTTACAATATGCAGTATCAAAACTGCTGCAAGGGGGGTGTCCTAACATCTTGGGGACAAGAACCTACGGCTGCATTCTCAGCTTTTCAGATTGCCGTCGGCCAATCTGGCACTTCCAACAAGACTGTGAAACTCCCCAGGAACTTCAAGCTTCTAGGACCAGGACCGGGATACTCATGTGGCCCTGCCAAGGTTGTTCCATCCACTGTCATCGCCTCAGATGATCATAGGCGCAAAACTCAAGCCCTGATGTCCTGGAATGCCACATGTACTTATTCCCAGTTTCTTGCCTCCAAGAACCCGAGTTGCTGTGTTTCTTTCTCATCTTTCTACAGTGATAAAATCACACCTTGCCCACCCTGTGCTTGTGGTTGTCAGAATAATGATACCTGCGTCACGAGCGGCTCAAAGATACCGCAAGAAGATGAAAAAAACACCCTCAAGAAGGTCAATAACCCGCCATTGTTACAATGCACACACCACATGTGCCGTGTTAGGGTTCACTGGCATGTGAAATTCAACTATCATGATTATTGGAGAGCCAAGATCGCGATCATTAACTTCGACTATCGAAATAACTATAGTCAATGGACTCTTGTTGCACAGCATCCCAACCTCAACAATGTCACCCAAGTTTTTAGCTTTCAATACAAGCCAGTTCTTCCTTATGAATCCATAAATGACACAGGCATGTTCTACGGCTTGAAATACTACAATGACATGTTGATGCAAGCTGGGCCTCTAGGGAATGTTCAGTCTGAGGTGCTTATGAAGAAGGACAAGAACACTTTCACACTCAAGCAGGGATGGGCGTTTCCCAGGAAGGTCTACTTCAATGGTGACGAGTGCATGCTACCGCCTCCAGACTCGTACCCTACCTTGCCAAATTCCGCTGATAAACTACCAACAAGTGTTTCATTCGTGGCAATCTATGTGGCTTTTAGCATATTTTTTCATATGGTGATGACAGTTGTACATTGA 1344 0.4487 MGFDNVKELKLVALIALCFVVISPAVAYDPLDPTGNVTIRWDIMSWTSDGYLATVTIFNFQLYRNIMNPGWTLGWTWAKKEIIWTMMGAQATEQGDCSKFKLKIPHSCKRNPQVVDLLPGAPYNMQYQNCCKGGVLTSWGQEPTAAFSAFQIAVGQSGTSNKTVKLPRNFKLLGPGPGYSCGPAKVVPSTVIASDDHRRKTQALMSWNATCTYSQFLASKNPSCCVSFSSFYSDKITPCPPCACGCQNNDTCVTSGSKIPQEDEKNTLKKVNNPPLLQCTHHMCRVRVHWHVKFNYHDYWRAKIAIINFDYRNNYSQWTLVAQHPNLNNVTQVFSFQYKPVLPYESINDTGMFYGLKYYNDMLMQAGPLGNVQSEVLMKKDKNTFTLKQGWAFPRKVYFNGDECMLPPPDSYPTLPNSADKLPTSVSFVAIYVAFSIFFHMVMTVVH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00046 447 PANTHER PROTEIN COBRA 16 431 IPR006918 GO:0010215|GO:0016020
Pral4212g00046 447 PIRSF COBRA 3 445 IPR006918 GO:0010215|GO:0016020
Pral4212g00046 447 Pfam COBRA-like protein 51 214 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00046 Pral-Chr4212 215078 217399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00046 8 440 COBRA Gene Family AT3G02210 58.486 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00046 - - gmx:100813134 780.785