Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00043 ATGGAAACGGCAATGGTGGCAAGCTTCGCAGCCAGAAGAAGCCTCTGGTGTATCCTCCTAAATCGCGCCCACTACTTTTCAACGGTCTCCAGTTCTATTGACCCCTTTGATACAAAATTATCCCAGCAATCTCAGTACAGGAAAGAGATTTCACTTGCCAACCTCTTCCAAAGGTATGGGTTCCCACCATCACAAATTCAAGGATTTCTCGCAAAGAATCGTTTCCTCTTGAATTCCAATTTACAAGAGTTAGAAAAGTGTCTTTCTACTCTATTATCATTCAGGATTCCGCAAAACTCCTTCATTTCTTTGGTACGCGATTGTCCTGGGATATTGGAACACCAGTTTCTCAAGAAATGGGAAGCATGTTTCTCACAACTGCGCGTTTTGACCCCTTCCCCACTTATGATCAGAAATTTCTTGCAATACTTTAGGAGGTATCACCTAGACCCTGGTGAACTTTCAAAAAGCATTGAGATCTTGAGGGGTTTAGGCTTCACGCATGGTGCTATAGCTCGGGTTTTCGAGGACTTCCCTACTGTGGTCGTGATGCCTGAGGGAGAAATTCTTTCTATAATTGAATTTCTCACGGAAATTGGGATTCCCAGGGACAAGGTTGATCGAGTCATAAGTTTGCATCCTAGAGTTTTGGGACTTGGGATCAAAGACCGGTTGAAACCGTTGCTCTGTGAGTTGAGCGATTTGGGATTTTCTGATGATGAGATTATAAAGGAGATAATTAGGGAGCCCAAGATTCTGGGAATGGAACTAGGGGAATTTTCACGGTGTTTAAAATTGCTCAAGACTTTAGAATGTAGAGAACCTATCAAAGAGAAGATTTTCAGAGAGGGTATACTGAGAGCCGGTTTTGAAGTAAAATTGAGAGTGGATTGCTTGTGTAGTCATGGTTTAATCCGCAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCGAGGTTGATTACTTATGACTTGGAGAACATTGAAAAGAAGATTGACTTTTTAGTACACAGGATGGAATATAGTGTGGATTGTTTACCTGACGTTCCAGAATATTTGGGTGTGAATTTCGAAAAGCAGATTGTGCCTCGACACAATGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGACTTGATTAAGCCAAGTAGACTTAGATTTTACAATCTATATGTCAAACCCTACCCAGAATGTGAAAAATTGTATGGGAGATTTTCAGGAAATGTTGAAGTTAAAAGCAAGCATCCAACGGGACTCTGGAAAATCTTTAAACCAAAAAAGTTCCCTGAAACCAACGAAGATGTGAAGAACATGAAGTCCTTTATGGAGGGAGTGGTGTAG 1359 0.4121 METAMVASFAARRSLWCILLNRAHYFSTVSSSIDPFDTKLSQQSQYRKEISLANLFQRYGFPPSQIQGFLAKNRFLLNSNLQELEKCLSTLLSFRIPQNSFISLVRDCPGILEHQFLKKWEACFSQLRVLTPSPLMIRNFLQYFRRYHLDPGELSKSIEILRGLGFTHGAIARVFEDFPTVVVMPEGEILSIIEFLTEIGIPRDKVDRVISLHPRVLGLGIKDRLKPLLCELSDLGFSDDEIIKEIIREPKILGMELGEFSRCLKLLKTLECREPIKEKIFREGILRAGFEVKLRVDCLCSHGLIRRDAFKVLWKEPRLITYDLENIEKKIDFLVHRMEYSVDCLPDVPEYLGVNFEKQIVPRHNVMEYLKAKGAIDFEVRLKDLIKPSRLRFYNLYVKPYPECEKLYGRFSGNVEVKSKHPTGLWKIFKPKKFPETNEDVKNMKSFMEGVV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00043 452 PANTHER CGI-12 PROTEIN-RELATED 39 401 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 Pfam mTERF 294 393 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 Pfam mTERF 146 264 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 Gene3D Transcription termination factor 3, mitochondrial 184 411 IPR038538 -
Pral4212g00043 452 SMART mt_12 243 273 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 SMART mt_12 310 341 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 SMART mt_12 67 97 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 SMART mt_12 137 167 IPR003690 GO:0003690|GO:0006355
Pral4212g00043 452 SMART mt_12 342 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00043 Pral-Chr4212 201271 203525 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4212g00043 mTERF 2.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00043 - - pcin:129319850 798.119