Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4212g00030 ATGAGTGAAGATTCAAGAGAAGGCTATTACAAAGCCAAGCAAGAGGGAGCTACCATGAACAACAAGATCGACAAATTCTCAAAGGTACCTTCTTCAAGACAGTGGCCTGGCTTTAGAAATCCAAGAATCGTACGAGTTTCTCGATCTTTCGGAGGAAAAGATAGGCATAGCAAAGTCTTCACCATAAGAGGACTAAGAGACAGAAGGATTAGGCTATCAGTTCCCACAGCAGTTCAGCTTTATGATCTTCAAGATAGGCTTGGATTTAGCCAACCCAGTAAGGTCATAGATTGGTTGCTTGAAGCCACAAAGTATGATATTGATAAGCTCCCACCTCTTCAAATGCCTTATGGCTTCCCTCAATTTCATCCACAAGCCCTACTTCCTCACCACCATGAACCAGCAATATCTTTGCACTCTTCTCTTGATATAGGATCTGTGTTTGAGAAAGGAAAGTGGGTCAAAGCAAGTGAAGAAGAAAATGAGGATAATGGGTTTGGTGAGATCCCATTTCAGAAGCATTTTCCCTCGGGGGCTCATCAGTACTATAATGGCATGCCATGTAATTATAACCCCTATCAGTTGGAACCTGCGAGCCTATCTTTATCCCAATTTGGAAGCCATGGATTAGTGTTTCCTTCACAGACAGAATATGCGAACACTCAAAGCAGTAGCGGCAACGGCGTGCAATTTTCATCTTCTTTGCCTGCTGTAGCACCACAACCTTCTGGTTCTAGTAAATTACTGTTTTGCCCACCTTCTTCTTCTTCTTCTGCTGCCACAGTACCCTCGTTTTTTCTTCCACATCAGATTGCCACCTCAGCAGAAGACAGTGATCCGAGGGGACAATTCAGGAACCATGTTCAGTTCTTGAGCTCGTCAAGTTCTCATGTACCAGCAGCAACTCCTAATTACCCTCACATTTCATGTCTGAAACCTCTCCCAGTACCATTTACTTCTAAGCTTCTTGATTCAGATCATAATAATAATCAACCAAACAAAGGAAGTACCCTTCCATTCATATCTCATAGTTGA 1035 0.428 MSEDSREGYYKAKQEGATMNNKIDKFSKVPSSRQWPGFRNPRIVRVSRSFGGKDRHSKVFTIRGLRDRRIRLSVPTAVQLYDLQDRLGFSQPSKVIDWLLEATKYDIDKLPPLQMPYGFPQFHPQALLPHHHEPAISLHSSLDIGSVFEKGKWVKASEEENEDNGFGEIPFQKHFPSGAHQYYNGMPCNYNPYQLEPASLSLSQFGSHGLVFPSQTEYANTQSSSGNGVQFSSSLPAVAPQPSGSSKLLFCPPSSSSSAATVPSFFLPHQIATSAEDSDPRGQFRNHVQFLSSSSSHVPAATPNYPHISCLKPLPVPFTSKLLDSDHNNNQPNKGSTLPFISHS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4212g00030 344 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 284 IPR005333 GO:0003700
Pral4212g00030 344 MobiDBLite consensus disorder prediction 322 344 - -
Pral4212g00030 344 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Pral4212g00030 344 Pfam TCP family transcription factor 52 124 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4212g00030 Pral-Chr4212 167745 169765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4212g00030 37 296 TCP Transcription Factor Family AT5G60970 40.196 4.07e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4212g00030 TCP 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4212g00030 - - pcin:129320929 536.569