Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00076 ATGCATGGGCTCCTACCAACCGCCCACCAAAAGCCCGCATGGATAAGGGCCCATGATACCCTGGAGTCCATTGTTCATCAAGCTACATGCCGACGTCAAAAGTCAAATTTCACGATGCCACAGGATCATACCCCAACCAGCATAAGCTCCGCCGTTGCACCCTCCGGCAGCACAGCAATGCCGCCTGGGAGATCGGGCCTAGCACAATCGGAGCCGACACTGGCAAGGAAGCGCCTACGGTCGGATTCCGCCTATCTTGGGAATGGTTTAGAAGAATGTGAACCCAGCAGTGGCTGTTGTGCTGGTGTCAGCAGGCACTTGAAGAGAAGTAAAACACTTGAGGACGATTCCCCTTCTCACTGTGAATCGGAAAACCAAGACCTAGAAGAAGACAGAGACACCAAGGAAGAAACAGGCCGCTCCAACTCAACAAGAGGAAATAGAGCCGCGGCTATTCATAACCAGAGTGAGCGGAGACGAAGGGATAGAATTAATCAGAAAATGAAAGCTTTGCAGAGGTTGGTGCCCAACGCCAGCAAGAACGACAAAGCTTCAATATTAGACGGAGTAATTGAGTACTTAAAGCAGCTCCAAGCACAGATACAGATGATGAGTATGAGAAACATGCCCCAGCAGATGATGATGATGATGATGCAACAACAGCTTCAGATGTCTATGCTGGCCAGAATGGGCCTTGGACTGGGCTCAAGCTCAGGCCAAGGCCCAGGGTTGGGCCTGCTTAACACCAATGCCATCATGGCTCCACGCCCACCAGTTCTTCCTTCTCTTCCACAACTCTCAGTTGCAGCTCCTCCTATTACTCCTTCCCTCATGATGTCTCCATTGGTTCAAGCCCATGCTCCTCTTCCGGAGCCTGAACCCTCATCTGCAGCTCCCTCCAATGCCTCAGTTTCTTTGCCTGATCCTTTTACAACTTTTCTTTCACAACCAGTTAATATGGATATTCTCAGCAACATGGCGGCGCTTTACCGGCAACATATGAGACAGAACAACCAGAGCATGGGCAGCCTGTCCCAACAACAACATCATGGACAAAGGAATTGA 1065 0.5052 MHGLLPTAHQKPAWIRAHDTLESIVHQATCRRQKSNFTMPQDHTPTSISSAVAPSGSTAMPPGRSGLAQSEPTLARKRLRSDSAYLGNGLEECEPSSGCCAGVSRHLKRSKTLEDDSPSHCESENQDLEEDRDTKEETGRSNSTRGNRAAAIHNQSERRRRDRINQKMKALQRLVPNASKNDKASILDGVIEYLKQLQAQIQMMSMRNMPQQMMMMMMQQQLQMSMLARMGLGLGSSSGQGPGLGLLNTNAIMAPRPPVLPSLPQLSVAAPPITPSLMMSPLVQAHAPLPEPEPSSAAPSNASVSLPDPFTTFLSQPVNMDILSNMAALYRQHMRQNNQSMGSLSQQQHHGQRN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00076 354 CDD bHLH_AtPIF_like 148 208 IPR047265 -
Pral4210g00076 354 MobiDBLite consensus disorder prediction 35 56 - -
Pral4210g00076 354 Pfam Helix-loop-helix DNA-binding domain 153 198 IPR011598 GO:0046983
Pral4210g00076 354 Coils Coil 154 181 - -
Pral4210g00076 354 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 47 341 IPR031066 -
Pral4210g00076 354 MobiDBLite consensus disorder prediction 110 142 - -
Pral4210g00076 354 SMART finulus 154 203 IPR011598 GO:0046983
Pral4210g00076 354 MobiDBLite consensus disorder prediction 110 163 - -
Pral4210g00076 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Pral4210g00076 354 MobiDBLite consensus disorder prediction 35 73 - -
Pral4210g00076 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 217 IPR036638 GO:0046983
Pral4210g00076 354 Gene3D - 144 208 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00076 Pral-Chr4210 420587 423992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00076 1 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 41.304 7.29e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4210g00076 HLH 8.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00076 - - dzi:111317577 246.128