Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00075 ATGACTGAGCCTTTGCTTCCAAGCTCCGTTCTCCCACCTCAACAAAGACAAGTCGATTCCTCCTCTCACGTGCATACCCTCCCGCCTGTCTCCATGTCTAATTATGAGGTTGCAGAGCTAACCTGGGAAAATGGCCTGCCAATCATGCATGGGCTCCTACCAACCGCCCACCAAAAGCCCGCATGGATAAGGGCCCATGATACCCTGGAGTCCATTGTTCATCAAGCTACATGCCGACGTCAAAAGTCAAATTTCACGATGCCACAGGATCATACCCCAACCAGCATAAGCTCCGCCGTTGCACCCTCCGGCAGCACAGCAATGCCGCCTGGGAGATCGGGCCTAGCACAATCGGAGCCGACACTGGCAAGGAAGCGCCTACGGTCGGATTCCGCCTATCTTGGGAATGGTTTAGAAGAATGTGAACCCAGCAGTGGCTGTTGTGCTGGTGTCAGCAGGCACTTGAAGAGAAGTAAAACACTTGAGGACGATTCCCCTTCTCACTGTGAATCGGAAAACCAAGACCTAGAAGAAGACAGAGACACCAAGGAAGAAACAGGCCGCTCCAACTCAACAAGAGGAAATAGAGCCGCGGCTATTCATAACCAGAGTGAGCGGAGACGAAGGGATAGAATTAATCAGAAAATGAAAGCTTTGCAGAGGTTGGTGCCCAACGCCAGCAAGAACGACAAAGCTTCAATATTAGACGGAGTAATTGAGTACTTAAAGCAGCTCCAAGCACAGATACAGATGATGAGTATGAGAAACATGCCCCAGCAGATGATGATGATGATGATGCAACAACAGCTTCAGATGTCTATGCTGGCCAGAATGGGCCTTGGACTGGGCTCAAGCTCAGGCCAAGGCCCAGGGTTGGGCCTGCTTAACACCAATGCCATCATGGCTCCACGCCCACCAGTTCTTCCTTCTCTTCCACAACTCTCAGTTGCAGCTCCTCCTATTACTCCTTCCCTCATGATGTCTCCATTGGTTCAAGCCCATGCTCCTCTTCCGGAGCCTGAACCCTCATCTGCAGCTCCCTCCAATGCCTCAGTTTCTTTGCCTGATCCTTTTACAACTTTTCTTTCACAACCAGTTAATATGGATATTCTCAGCAACATGGCGGCGCTTTACCGGCAACATATGAGACAGAACAACCAGAGCATGGGCAGCCTGTCCCAACAACAACATCATGGACAAAGGAATTGA 1209 0.5062 MTEPLLPSSVLPPQQRQVDSSSHVHTLPPVSMSNYEVAELTWENGLPIMHGLLPTAHQKPAWIRAHDTLESIVHQATCRRQKSNFTMPQDHTPTSISSAVAPSGSTAMPPGRSGLAQSEPTLARKRLRSDSAYLGNGLEECEPSSGCCAGVSRHLKRSKTLEDDSPSHCESENQDLEEDRDTKEETGRSNSTRGNRAAAIHNQSERRRRDRINQKMKALQRLVPNASKNDKASILDGVIEYLKQLQAQIQMMSMRNMPQQMMMMMMQQQLQMSMLARMGLGLGSSSGQGPGLGLLNTNAIMAPRPPVLPSLPQLSVAAPPITPSLMMSPLVQAHAPLPEPEPSSAAPSNASVSLPDPFTTFLSQPVNMDILSNMAALYRQHMRQNNQSMGSLSQQQHHGQRN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00075 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Pral4210g00075 402 MobiDBLite consensus disorder prediction 158 211 - -
Pral4210g00075 402 MobiDBLite consensus disorder prediction 83 122 - -
Pral4210g00075 402 Coils Coil 202 229 - -
Pral4210g00075 402 Pfam Helix-loop-helix DNA-binding domain 201 246 IPR011598 GO:0046983
Pral4210g00075 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 265 IPR036638 GO:0046983
Pral4210g00075 402 CDD bHLH_AtPIF_like 196 256 IPR047265 -
Pral4210g00075 402 MobiDBLite consensus disorder prediction 83 104 - -
Pral4210g00075 402 Gene3D - 192 256 IPR036638 GO:0046983
Pral4210g00075 402 MobiDBLite consensus disorder prediction 7 28 - -
Pral4210g00075 402 MobiDBLite consensus disorder prediction 158 190 - -
Pral4210g00075 402 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 37 389 IPR031066 -
Pral4210g00075 402 SMART finulus 202 251 IPR011598 GO:0046983
Pral4210g00075 402 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00075 Pral-Chr4210 420587 424346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00075 34 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 38.919 5.74e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4210g00075 HLH 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00075 - - dzi:111317577 273.092