Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00074 ATGACTGAGCCTTTGCTTCCAAGCTCCGTTCTCCCACCTCAACAAAGACAAGTCGATTCCTCCTCTCACGTGCATACCCTCCCGCCTGTCTCCATGAGATTCAGGTCTAATTATGAGGTTGCAGAGCTAACCTGGGAAAATGGCCTGCCAATCATGCATGGGCTCCTACCAACCGCCCACCAAAAGCCCGCATGGATAAGGGCCCATGATACCCTGGAGTCCATTGTTCATCAAGCTACATGCCGACGTCAAAAGTCAAATTTCACGATGCCACAGGATCATACCCCAACCAGCATAAGCTCCGCCGTTGCACCCTCCGGCAGCACAGCAATGCCGCCTGGGAGATCGGGCCTAGCACAATCGGAGCCGACACTGGCAAGGAAGCGCCTACGGTCGGATTCCGCCTATCTTGGGAATGGTTTAGAAGAATGTGAACCCAGCAGTGGCTGTTGTGCTGGTGTCAGCAGGCACTTGAAGAGAAGTAAAACACTTGAGGACGATTCCCCTTCTCACTGTGAATCGGAAAACCAAGACCTAGAAGAAGACAGAGACACCAAGGAAGAAACAGGCCGCTCCAACTCAACAAGAGGAAATAGAGCCGCGGCTATTCATAACCAGAGTGAGCGGAGACGAAGGGATAGAATTAATCAGAAAATGAAAGCTTTGCAGAGGTTGGTGCCCAACGCCAGCAAGAACGACAAAGCTTCAATATTAGACGGAGTAATTGAGTACTTAAAGCAGCTCCAAGCACAGATACAGATGATGAGTATGAGAAACATGCCCCAGCAGATGATGATGATGATGATGCAACAACAGCTTCAGATGTCTATGCTGGCCAGAATGGGCCTTGGACTGGGCTCAAGCTCAGGCCAAGGCCCAGGGTTGGGCCTGCTTAACACCAATGCCATCATGGCTCCACGCCCACCAGTTCTTCCTTCTCTTCCACAACTCTCAGTTGCAGCTCCTCCTATTACTCCTTCCCTCATGATGTCTCCATTGGTTCAAGCCCATGCTCCTCTTCCGGAGCCTGAACCCTCATCTGCAGCTCCCTCCAATGCCTCAGTTTCTTTGCCTGATCCTTTTACAACTTTTCTTTCACAACCAGTTAATATGGATATTCTCAGCAACATGGCGGCGCTTTACCGGCAACATATGAGACAGAACAACCAGAGCATGGGCAGCCTGTCCCAACAACAACATCATGGACAAAGGAATTGA 1218 0.5057 MTEPLLPSSVLPPQQRQVDSSSHVHTLPPVSMRFRSNYEVAELTWENGLPIMHGLLPTAHQKPAWIRAHDTLESIVHQATCRRQKSNFTMPQDHTPTSISSAVAPSGSTAMPPGRSGLAQSEPTLARKRLRSDSAYLGNGLEECEPSSGCCAGVSRHLKRSKTLEDDSPSHCESENQDLEEDRDTKEETGRSNSTRGNRAAAIHNQSERRRRDRINQKMKALQRLVPNASKNDKASILDGVIEYLKQLQAQIQMMSMRNMPQQMMMMMMQQQLQMSMLARMGLGLGSSSGQGPGLGLLNTNAIMAPRPPVLPSLPQLSVAAPPITPSLMMSPLVQAHAPLPEPEPSSAAPSNASVSLPDPFTTFLSQPVNMDILSNMAALYRQHMRQNNQSMGSLSQQQHHGQRN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00074 405 MobiDBLite consensus disorder prediction 86 125 - -
Pral4210g00074 405 Coils Coil 205 232 - -
Pral4210g00074 405 CDD bHLH_AtPIF_like 199 259 IPR047265 -
Pral4210g00074 405 Gene3D - 195 259 IPR036638 GO:0046983
Pral4210g00074 405 Pfam Helix-loop-helix DNA-binding domain 204 249 IPR011598 GO:0046983
Pral4210g00074 405 MobiDBLite consensus disorder prediction 86 107 - -
Pral4210g00074 405 MobiDBLite consensus disorder prediction 7 24 - -
Pral4210g00074 405 MobiDBLite consensus disorder prediction 161 214 - -
Pral4210g00074 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 199 248 IPR011598 GO:0046983
Pral4210g00074 405 MobiDBLite consensus disorder prediction 1 24 - -
Pral4210g00074 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 197 268 IPR036638 GO:0046983
Pral4210g00074 405 SMART finulus 205 254 IPR011598 GO:0046983
Pral4210g00074 405 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 40 392 IPR031066 -
Pral4210g00074 405 MobiDBLite consensus disorder prediction 161 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00074 Pral-Chr4210 420587 424347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00074 37 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 43.265 6.17e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4210g00074 HLH 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00074 - - dzi:111317577 272.322