Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00064 ATGTCAGAGCATGTAACAGATTCCTGGGGCTTACTGTTTATCTGTTCTTTAATCCTTTTCTCAGCGGGTAAAATAGTTGCCGGAGATTCTTTGGACACAGACAGAGAAGTTTTGCTTCAGCTCAAATTATACCTCAACAATCAAACTCTAGTAGACCAAGGACAATACACAAACTGGAACACGACCAGTTCGAATCCTTGTGAATGGTCGGGAATCTGGTGCAGCGGCAATGGAACAACGAGGAGAGTGGTCGGAGTCAACCTCACCGACAACAAAATCACCGGCGGGATATTCCAGAACTTCTCTCGGCTCACTGAGCTCAGACACCTTGACCTTTCCCGGAACACACTCTCCGGCAAGATTCCGGCGGACTTGAGGCGGTGCCGAAAGCTCGTGTATCTCAATCTCTCCTACAATATTCTTCCCGAAGAGTTGAATTTAATTGGCTTGACAAACCTTCAAATTCTTGACTTATCAGGCAATAGGCTTCACGGGGATCTCGGCTCTAATTTCCCTGCCATTTGTGACAACCTGATCAGCTTGAATATCTCAGGAAATAACTTCACGGGTAGGACTGATGAGTGCTTCGATCAGTGTTTGAAATTGCAGTACTTGGATTTGAGCACTAATAAGCTTAGAGGGCATATATGGATGGGAATTGCGAAGCTGAGAATGTTTTCCGTCTCAGAGAATTCTCTCGGCGGGAAAATTCCTCCGTCAGCTTTTCCAGTGCAGTGCAATCTTGAATTTCTTGACATTTCAGAGAATATGTTCGGAGGAAGTGTCCCTAAGGAGGTTGCCAACTGCAAGAATCTTACGACTCTGAATCTATCTAGCAACGAATTGGATGGACCGATACCTAAAGAAATTGGTTCGCTTTCTCGGATGGAGGCATTATACTTGGGGAACAACAGTTTCTCAAGAGACATCCCAGACGAACTCTTGAACTTGACCAATTTGGCATTCTTGGATTTAACTAGAAATCAATTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCAGGTGAAGTATCTTCTATTGCACTCAAATTCTTACACTGGAGGATTATCTTCATCAGGAATTCTCAGATTACCAAACATTTTACGCTTGGACCTAAGCTACAACAACTTCTCAGGTCCATTGCCCACAGAAATCTCACGAATGTCAAGCCTGAAGTTATTAATGTTAGCCTACAATCAATTCACTGGACCTATTCCACCTGAATTTGGAAACTTGCCTAGCCTTCAAGCTCTTGACTTATCAGTCAACAACTTATCTGGGCCAATCCCACCAACTCTTGGAAACTTGACCTCTCTTTTATGGCTCATGCTTGCAAATAATTCATTAACAGGTGAAATCCCAAGAGAGTTGGGAAACTGTTCGAGCTTATTATGGCTAAACCTTGCAAATAATAAACTCACAGGAAAATTCCCACCTGAATTGACCAACATAGGGAGAAACGCCATGGTCACATTTGAATCAAATAGGCAATATGACACAGTCAGTGCTGGCTCTGGTGAGTGCTTAGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCATTTAGTTTTGTTTATGACATCCTTACGAGGAAGAATTGCAGAAGCATTTGGGACAGATTGCTTAAAGGACATGGGATTTTCCCGATTTGCAGTGCAGGTTCATTTTCACCATATCAAATCTCTGGCTATGTTCAGCTAAGTGGGAACCAACTCTCAGGTGAAATTCCTCCAGAAATTGGAACCATGCAGAACTTGAGCATGTTGCATTTAGGGTTTAATAAATTTTCTGGGAAACTACCTGCACAGGTGAAAAGTATACCGCTTGTGGTATTGAACATAACAAGAAACAAGTTTTCTGGAGAAATCCCTAGCGAAGTTGGAACCATGACGTGTTTACAGAACCTTGATCTCTCCTACAACAATTTTTCTGGGGTTTTCCCCCCAAGTTTGAACAGCTTGTCCGAACTCACCAAGTTCAACATTTCTTATAATCCCTTGATTTCAGGTGAGATTCCATCGCCAGGACAACTAGCTACGTTCGAGAAATACTCATATTTGGGGGATCCCCTCTTGGATCTCCCAAGCTTCTTCGACAACTCCACCGATGATCACAAAAACAAGACTAACAGACCAATCAAAAAATCCACGAATGTCTCTGTTTTCCTGGTGTTCTTCGCTCTCATTCTGGCTTTCTTAGTGTTCGGTCTTCTTACTGTCATAGTCTGTCTACTGATAAAAACGCCGTCGGAAGAACCACTTGTGAGAGACATAAAACTCGACCCTGAGTCTGGAACCTCATCCCCATGGTTGTCGGACACAGTTAAGGTTATTCGACTGGACAGGACAGCTTTCACACACTCTGACATCTTGAAAGCCACGGGAAATTTCTCAGAAGACAGAATTATAGGCAAAGGAGGCTTCGGAACAGTGTACAGAGGTGTATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAGCTCCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTATGCGGCCATGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGACGGTTCGGAAAAAATATTGGTTTACGAATACATTTCAGGTGGAAGCTTAGAAGATCTCGTCACCGACAGAACAAAATTCACTTGGAAACGACGGCTAGAAGTAGCCATTGACGTTGCTCGAGCTTTGGTTTACTTACACCACGAATGCTACCCTTCAATCGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAGCAAAACAGGGAAGGCCAAAGTTACGGACTTTGGGCTAGCCAGAGTAGTTGACGTTGGAGACAGCCACGTCAGCACGATGGTGGCTGGGACGGTGGGGTACGTGGCGCCGGAGTACGGCCACACATGGAAGGCGACGACGAAAGGTGATGTGTACAGTTACGGAGTGTTGGCTATGGAGCTGGCGACTGGAAGAAGAGCATTGGACGGAGGAGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGGGTCATGGAAGCAATAAGCCGATCGGCCGGGCGGTGATTCCGGTGGCGCTGATGGGTTCTGGCTTACTTGAAGGTATGGAGGAGATGGTGGAGCTGTTAAGAATAGGGGTGAGATGCACGGCGGAGACACCGCAGGCCAGGCCGACGATGAAGGAGGTTCTGGATATGCTTATCAAGGTGTATAACCCCAAGGCAGATTCAAGCTGTGAACATACGAGTCATTAA 3276 0.4524 MSEHVTDSWGLLFICSLILFSAGKIVAGDSLDTDREVLLQLKLYLNNQTLVDQGQYTNWNTTSSNPCEWSGIWCSGNGTTRRVVGVNLTDNKITGGIFQNFSRLTELRHLDLSRNTLSGKIPADLRRCRKLVYLNLSYNILPEELNLIGLTNLQILDLSGNRLHGDLGSNFPAICDNLISLNISGNNFTGRTDECFDQCLKLQYLDLSTNKLRGHIWMGIAKLRMFSVSENSLGGKIPPSAFPVQCNLEFLDISENMFGGSVPKEVANCKNLTTLNLSSNELDGPIPKEIGSLSRMEALYLGNNSFSRDIPDELLNLTNLAFLDLTRNQFGGDIQEIFGKFKQVKYLLLHSNSYTGGLSSSGILRLPNILRLDLSYNNFSGPLPTEISRMSSLKLLMLAYNQFTGPIPPEFGNLPSLQALDLSVNNLSGPIPPTLGNLTSLLWLMLANNSLTGEIPRELGNCSSLLWLNLANNKLTGKFPPELTNIGRNAMVTFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSIWDRLLKGHGIFPICSAGSFSPYQISGYVQLSGNQLSGEIPPEIGTMQNLSMLHLGFNKFSGKLPAQVKSIPLVVLNITRNKFSGEIPSEVGTMTCLQNLDLSYNNFSGVFPPSLNSLSELTKFNISYNPLISGEIPSPGQLATFEKYSYLGDPLLDLPSFFDNSTDDHKNKTNRPIKKSTNVSVFLVFFALILAFLVFGLLTVIVCLLIKTPSEEPLVRDIKLDPESGTSSPWLSDTVKVIRLDRTAFTHSDILKATGNFSEDRIIGKGGFGTVYRGVFSDGREVAVKKLQREGLEGEKEFRAEMEVLCGHGFGWPHPNLVTLYGWCLDGSEKILVYEYISGGSLEDLVTDRTKFTWKRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDSKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGSNKPIGRAVIPVALMGSGLLEGMEEMVELLRIGVRCTAETPQARPTMKEVLDMLIKVYNPKADSSCEHTSH 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00064 1091 Gene3D Ribonuclease Inhibitor 30 213 IPR032675 -
Pral4210g00064 1091 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 334 - -
Pral4210g00064 1091 Gene3D Ribonuclease Inhibitor 548 712 IPR032675 -
Pral4210g00064 1091 Gene3D Ribonuclease Inhibitor 340 410 IPR032675 -
Pral4210g00064 1091 ProSiteProfiles Protein kinase domain profile. 799 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00064 1091 Gene3D Ribonuclease Inhibitor 226 338 IPR032675 -
Pral4210g00064 1091 SUPERFAMILY L domain-like 338 670 - -
Pral4210g00064 1091 ProSitePatterns Protein kinases ATP-binding region signature. 805 828 IPR017441 GO:0005524
Pral4210g00064 1091 SMART serkin_6 799 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00064 1091 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Pral4210g00064 1091 CDD STKc_IRAK 805 1076 - -
Pral4210g00064 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 246 1076 - -
Pral4210g00064 1091 FunFam Putative LRR receptor-like serine/threonine-protein kinase 560 707 - -
Pral4210g00064 1091 Gene3D Ribonuclease Inhibitor 411 506 IPR032675 -
Pral4210g00064 1091 SUPERFAMILY RNI-like 80 354 - -
Pral4210g00064 1091 FunFam Putative LRR receptor-like serine/threonine-protein kinase 341 502 - -
Pral4210g00064 1091 SUPERFAMILY Protein kinase-like (PK-like) 782 1075 IPR011009 -
Pral4210g00064 1091 Gene3D Transferase(Phosphotransferase) domain 1 879 1090 - -
Pral4210g00064 1091 Pfam Leucine rich repeat 151 212 IPR001611 GO:0005515
Pral4210g00064 1091 Pfam Leucine rich repeat 86 139 IPR001611 GO:0005515
Pral4210g00064 1091 Pfam Protein kinase domain 800 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00064 1091 Gene3D Phosphorylase Kinase; domain 1 768 878 - -
Pral4210g00064 1091 FunFam serine/threonine-protein kinase BRI1-like 2 761 878 - -
Pral4210g00064 1091 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 879 1082 - -
Pral4210g00064 1091 SMART LRR_typ_2 104 128 IPR003591 -
Pral4210g00064 1091 SMART LRR_typ_2 366 390 IPR003591 -
Pral4210g00064 1091 SMART LRR_typ_2 414 437 IPR003591 -
Pral4210g00064 1091 SMART LRR_typ_2 632 656 IPR003591 -
Pral4210g00064 1091 SMART LRR_typ_2 438 462 IPR003591 -
Pral4210g00064 1091 SMART LRR_typ_2 150 177 IPR003591 -
Pral4210g00064 1091 SMART LRR_typ_2 293 317 IPR003591 -
Pral4210g00064 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Pral4210g00064 1091 PRINTS Leucine-rich repeat signature 150 163 - -
Pral4210g00064 1091 PRINTS Leucine-rich repeat signature 107 120 - -
Pral4210g00064 1091 Pfam Leucine Rich repeat 269 284 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00064 Pral-Chr4210 389262 393531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00064 12 1084 Receptor kinase-like Gene Family AT1G55610 31.303 1.32e-147 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pral4210g00064 Pkinase 6.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00064 - - gmx:100783886 1541.55