Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00061 ATGGGTTGTGTCTACTCGAGGCAGACGGTGTCGGTGACGCCGGCGATCGATCACTCCGATCTGTTTCGAGGCAATGCGAGTTTGGGGCATTCGGGAAGGAGCTTGGGAGAGTTCGATGGTAAAAAAAAGAAGAAAAAGAGTGAGTCACTGGGCGAGTCTGAGAGAGAGAGTTCAACTTGGGGATGTGATGAATCTTTGAGCTTCAGATTGGGGAATCTGCAGAAGTACGTGGAAGGAGAGCAAATCGCCGCCGGTTGGCCGGCGTGGCTTACTGCCGTCGCCAGCGAAGCCATCCACGGTTGGGTGCCCCTCCGAGCCGATGCGTTTGAGAAGCTCGAGAAGATTGGGCAGGGTACGTACAGTAGTGTGTTCCGAGCGAAGGAACTTGAGACAGGGAAGATAGTAGCACTGAAGAAGGTGCGGTTTGACATTTTTGAGCCAGAGAGTGTGCGGTTTATGGCACGAGAAATAATGATCCTGAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGTTTGATTACTTCCAAATTGTCATCTAGCATATACCTTGTGTTCGAGTACATGGAACATGACATCACAGGGCTCTTGTCCAGCCCTGATATCAAATTTAGCGAATCACAGATTAAATGTTACATGAAACAGCTGTTGTCTGGACTTGATCATTGTCATTCACGTGGTGTAATGCATCGAGACATCAAAGGATCAAATCTTCTAGTGAACAATGAAGGGATACTAAAGGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAACAGCCCCTGACCAGCCGTGTTGTCACTTTGTGGTACCGTCCTCCTGAACTTTTGCTGGGTTCGACAGATTATGGTCCCTCTGTAGATCTATGGAGTGTTGGCTGCGTATTTGCAGAACTTCTTTTCAGAAAGCCAGTTCTTCAGGGGAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAGGCCGCAGCAAACATACAATAGTTGCCTCCAAGAGACATTTAAAGATTTTCCCATAACTACTGTGAATCTTCTTCAAACTCTTCTCTCCATTGAATCATACAAGCGCGGAACTGCTTCATCTGCTCTTTTATCAGAGTATTTCAAGACAAAGCCTTATGCATGTGACCCGTCAAGCTTGCCGGTATACTCACCTAGCAAGGAGATTGATGCAAAACACTGGGAGGAGTCAAGAAGAAAAAAGATTGGTGGAAGATCTCGGGGACCTGAAACAAGAAAACCATCAAGAAAGCCACAAGGATTCAGTAAACTAGCCCCAGCTGAGAGTTTGGTTAATCAAGCTCGAAATTCCCAAGCGTTCAATCGTAGAACTTCCTGCATCCTAAAAGAGAACACCAATATAAGTGAGGAAGTGCCAAAGCCATCAACTGATAGAGAAGATGCTTCCCATGTTAAAAATCCGTCTCATGGAGATATTCCCATATTACAAGTTTCAACTTCAAGTGGCTTTGCATGGGCAAAGAGGCGTAAAGATGATGCTTCAAGAAGGTCTCATTGTCGATCTATTTCAAGGGGACATATTTTGAATTCATCAGAACATTCTTCCGTACATTCAAGAAACAACCTTGACTCCAGAAACCAGGAAAATAAGGAATTCTGCGGGGGACGTTCCAACTCAAGGGGCCATGACATACGTGAAATCTCTAAGATTGCAATGTTGAACCAATGGGGCAAGTTTGATCGCCCAGACTCATTTGATGCTTCTGATGAATACCACTCACAAGAACTATCCATAGCCCTTTATCACAGGGAATATTCAGCATCCAGGAGAAGTAAAATGGTTAGTTTGATTTTCAAGCTTGTTTACATGACTTCACTTGCCTCTGATTCCAATCCTTATCGTGTACAATTATTTTATCAGGATTCTGGAGAGAAGGTAGAATTTTCAGGACCCCTGCTATCTCAAATGCATGCGGTTGATGAGCTGTTAGAAAGACACGAGCGTCACATCCGCCGTACAGTACGAAGATCTTGGTTTCAGAAAGGTAATAGGCACTAA 2094 0.4446 MGCVYSRQTVSVTPAIDHSDLFRGNASLGHSGRSLGEFDGKKKKKKSESLGESERESSTWGCDESLSFRLGNLQKYVEGEQIAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPDIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLFRKPVLQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFRPQQTYNSCLQETFKDFPITTVNLLQTLLSIESYKRGTASSALLSEYFKTKPYACDPSSLPVYSPSKEIDAKHWEESRRKKIGGRSRGPETRKPSRKPQGFSKLAPAESLVNQARNSQAFNRRTSCILKENTNISEEVPKPSTDREDASHVKNPSHGDIPILQVSTSSGFAWAKRRKDDASRRSHCRSISRGHILNSSEHSSVHSRNNLDSRNQENKEFCGGRSNSRGHDIREISKIAMLNQWGKFDRPDSFDASDEYHSQELSIALYHREYSASRRSKMVSLIFKLVYMTSLASDSNPYRVQLFYQDSGEKVEFSGPLLSQMHAVDELLERHERHIRRTVRRSWFQKGNRH 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00061 697 Gene3D Transferase(Phosphotransferase) domain 1 192 431 - -
Pral4210g00061 697 SUPERFAMILY Protein kinase-like (PK-like) 102 400 IPR011009 -
Pral4210g00061 697 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 476 507 - -
Pral4210g00061 697 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Pral4210g00061 697 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00061 697 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00061 697 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Pral4210g00061 697 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Pral4210g00061 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pral4210g00061 697 MobiDBLite consensus disorder prediction 555 572 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 35 56 - -
Pral4210g00061 697 CDD STKc_CDK9_like 109 393 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 33 56 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 415 455 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 415 442 - -
Pral4210g00061 697 FunFam probable serine/threonine-protein kinase At1g54610 192 432 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 484 498 - -
Pral4210g00061 697 MobiDBLite consensus disorder prediction 536 572 - -
Pral4210g00061 697 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00061 697 MobiDBLite consensus disorder prediction 536 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00061 Pral-Chr4210 361819 365836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00061 101 425 Core Cell Cycle Gene Families AT5G10270 49.853 7.32e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral4210g00061 Pkinase 5.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00061 - - gmx:100803328 1004.2