Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00060 ATGGGTTGTGTCTACTCGAGGCAGACGGTGTCGGTGACGCCGGCGATCGATCACTCCGATCTGTTTCGAGGCAATGCGAGTTTGGGGCATTCGGGAAGGAGCTTGGGAGAGTTCGATGGTAAAAAAAAGAAGAAAAAGAGTGAGTCACTGGGCGAGTCTGAGAGAGAGAGTTCAACTTGGGGATGTGATGAATCTTTGAGCTTCAGATTGGGGAATCTGCAGAAGTACGTGGAAGGAGAGCAAATCGCCGCCGGTTGGCCGGCGTGGCTTACTGCCGTCGCCAGCGAAGCCATCCACGGTTGGGTGCCCCTCCGAGCCGATGCGTTTGAGAAGCTCGAGAAGATTGGGCAGGGTACGTACAGTAGTGTGTTCCGAGCGAAGGAACTTGAGACAGGGAAGATAGTAGCACTGAAGAAGGTGCGGTTTGACATTTTTGAGCCAGAGAGTGTGCGGTTTATGGCACGAGAAATAATGATCCTGAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGTTTGATTACTTCCAAATTGTCATCTAGCATATACCTTGTGTTCGAGTACATGGAACATGACATCACAGGGCTCTTGTCCAGCCCTGATATCAAATTTAGCGAATCACAGATTAAATGTTACATGAAACAGCTGTTGTCTGGACTTGATCATTGTCATTCACGTGGTGTAATGCATCGAGACATCAAAGGATCAAATCTTCTAGTGAACAATGAAGGGATACTAAAGGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAACAGCCCCTGACCAGCCGTGTTGTCACTTTGTGGTACCGTCCTCCTGAACTTTTGCTGGGTTCGACAGATTATGGTCCCTCTGTAGATCTATGGAGTGTTGGCTGCGTATTTGCAGAACTTCTTTTCAGAAAGCCAGTTCTTCAGGGGAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAGGCCGCAGCAAACATACAATAGTTGCCTCCAAGAGACATTTAAAGATTTTCCCATAACTACTGTGAATCTTCTTCAAACTCTTCTCTCCATTGAATCATACAAGCGCGGAACTGCTTCATCTGCTCTTTTATCAGAGTATTTCAAGACAAAGCCTTATGCATGTGACCCGTCAAGCTTGCCGGTATACTCACCTAGCAAGGAGATTGATGCAAAACACTGGGAGGAGTCAAGAAGAAAAAAGATTGGTGGAAGATCTCGGGGACCTGAAACAAGAAAACCATCAAGAAAGCCACAAGGATTCAGTAAACTAGCCCCAGCTGAGAGTTTGGTTAATCAAGCTCGAAATTCCCAAGCGTTCAATCGTAGAACTTCCTGCATCCTAAAAGAGAACACCAATATAAGTGAGGAAGTGCCAAAGCCATCAACTGATAGAGAAGATGCTTCCCATGTTAAAAATCCGTCTCATGGAGATATTCCCATATTACAAGTTTCAACTTCAAGTGGCTTTGCATGGGCAAAGAGGCGTAAAGATGATGCTTCAAGAAGGTCTCATTGTCGATCTATTTCAAGGGGACATATTTTGAATTCATCAGAACATTCTTCCGTACATTCAAGAAACAACCTTGACTCCAGAAACCAGGAAAATAAGGAATTCTGCGGGGGACGTTCCAACTCAAGGGGCCATGACATACGTGAAATCTCTAAGATTGCAATGTTGAACCAATGGGGCAAGTTTGATCGCCCAGACTCATTTGATGCTTCTGATGAATACCACTCACAAGAACTATCCATAGCCCTTTATCACAGGGAATATTCAGCATCCAGGAGAAGTAAAATGGATTCTGGAGAGAAGGTAGAATTTTCAGGACCCCTGCTATCTCAAATGCATGCGGTTGATGAGCTGTTAGAAAGACACGAGCGTCACATCCGCCGTACAGTACGAAGATCTTGGTTTCAGAAAGGTAAGAAGCATGAGAAGAATTTGGAAGACTAA 2031 0.4481 MGCVYSRQTVSVTPAIDHSDLFRGNASLGHSGRSLGEFDGKKKKKKSESLGESERESSTWGCDESLSFRLGNLQKYVEGEQIAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPDIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLFRKPVLQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFRPQQTYNSCLQETFKDFPITTVNLLQTLLSIESYKRGTASSALLSEYFKTKPYACDPSSLPVYSPSKEIDAKHWEESRRKKIGGRSRGPETRKPSRKPQGFSKLAPAESLVNQARNSQAFNRRTSCILKENTNISEEVPKPSTDREDASHVKNPSHGDIPILQVSTSSGFAWAKRRKDDASRRSHCRSISRGHILNSSEHSSVHSRNNLDSRNQENKEFCGGRSNSRGHDIREISKIAMLNQWGKFDRPDSFDASDEYHSQELSIALYHREYSASRRSKMDSGEKVEFSGPLLSQMHAVDELLERHERHIRRTVRRSWFQKGKKHEKNLED 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00060 676 FunFam probable serine/threonine-protein kinase At1g54610 192 432 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 476 507 - -
Pral4210g00060 676 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00060 676 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Pral4210g00060 676 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Pral4210g00060 676 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Pral4210g00060 676 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4210g00060 676 SUPERFAMILY Protein kinase-like (PK-like) 102 400 IPR011009 -
Pral4210g00060 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pral4210g00060 676 Gene3D Transferase(Phosphotransferase) domain 1 192 431 - -
Pral4210g00060 676 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 555 572 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 35 56 - -
Pral4210g00060 676 CDD STKc_CDK9_like 109 393 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 33 56 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 528 572 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 415 455 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 415 442 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 484 498 - -
Pral4210g00060 676 MobiDBLite consensus disorder prediction 535 554 - -
Pral4210g00060 676 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00060 Pral-Chr4210 361196 365834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00060 101 425 Core Cell Cycle Gene Families AT5G10270 49.853 4.48e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral4210g00060 Pkinase 4.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00060 - - gmx:100803328 1012.29