Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00056 ATGACATCAGTAAATATAATTTGTGGTCTTTCACGCCTTTCTGGATCAACTTCTCGACGATCATCTTTAAAACCTCTATATTGGGGTAAAGTGTCAAAGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAAACGTAGGCAGGCCCAAGTTGCACCAGAATTTGATGTTTCAGAGATAGAGACCCTTTTCTCAGCAGTTGTTCCAAAAACTTCTGATAAATCTGTAGGACGTTGTAAATCAGTTGGATCCAAATCTGACAAAGTCCACTTGATTGAACTGAAGAGGGCCAATAATGTTGAAATTATGCTCACAAAGATTAAGATGCCACTTTCTGAAATGATGGCTGCAATTCTAACTTTGGATGATACAGTATTAGATGTTGATCAGGTTGAAAGTCTTGGTAAGTACTGTCCCACTAAAGAGGAGATGGAACTTTTGAAGGGATATACTGGTGACTATGAGAATTTGGGAAGGTGCGAACAGTATTTTTTGGAGCACATGAAAGTTCCACGGGTGGAAGCAAAATTAGGAGTTTTTTCTTTCAAGATTCAGTTTAATCATCAGATTGTAGAATTTAAGAAAAGTTTAGGCACTGTGAACTCTGCTTGTGAAGAGGTCCGGAACTCTGACAACCTGAAGAATATTATGCAGAAAATTCTTTATTTGGGGAATACTCTGAATCAAGGAACAGCTAGGGGATCTGCTGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGAGACTCGTGCTTCTACTGGTAGGATGACACTAATGCATTATCTATGTAAGGTCTTAGCTGAAAAGTCTCCTGCACTCCTTGATTTTCACTTGGACCTTGTTAGCCTGGAAGTTGCTAGTAAGATACAATTAAAAGCATTAGCAGAAGAGATGGCGTCAATTAATAAGGGATTACGAAAAGTTAAACAGGAGCTTGCTGCATCTGAAAACGACGGCCCTTCATCGGAAAGTTTCCGCAACGTACACAGAGAATTTATTGAAGGTGCTGAGTTAGAGGAGGCATCTGTAACAACTCTATATTCTGTGGCGGGCAAAAATGCAGATGATCTTGCAAGATATTTCAATGAGGACCCTGCTCGTTACCCATTTGAACAAGTAACTGCGACGCTATTGAATTTCATGCGGTTGTTTCGGAAAGCACACGAAGAGAACATAAAACAAGCAGAGTTGGAGAAGAAAAGAGCTGAGAAAGAGGCTGAAGAGAAGGCTAAGGCAGATGCTGCTGCTGCTGCATCCAAAGAAGTTTCGTAG 1275 0.4016 MTSVNIICGLSRLSGSTSRRSSLKPLYWGKVSKALQGSLWEELQKRRQAQVAPEFDVSEIETLFSAVVPKTSDKSVGRCKSVGSKSDKVHLIELKRANNVEIMLTKIKMPLSEMMAAILTLDDTVLDVDQVESLGKYCPTKEEMELLKGYTGDYENLGRCEQYFLEHMKVPRVEAKLGVFSFKIQFNHQIVEFKKSLGTVNSACEEVRNSDNLKNIMQKILYLGNTLNQGTARGSAVGFKLDSLLKLTETRASTGRMTLMHYLCKVLAEKSPALLDFHLDLVSLEVASKIQLKALAEEMASINKGLRKVKQELAASENDGPSSESFRNVHREFIEGAELEEASVTTLYSVAGKNADDLARYFNEDPARYPFEQVTATLLNFMRLFRKAHEENIKQAELEKKRAEKEAEEKAKADAAAAASKEVS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00056 424 Coils Coil 386 418 - -
Pral4210g00056 424 SMART it6_source 13 422 IPR015425 -
Pral4210g00056 424 Pfam Formin Homology 2 Domain 20 385 IPR015425 -
Pral4210g00056 424 SUPERFAMILY Formin homology 2 domain (FH2 domain) 87 410 - -
Pral4210g00056 424 MobiDBLite consensus disorder prediction 402 424 - -
Pral4210g00056 424 ProSiteProfiles Formin homology-2 (FH2) domain profile. 13 411 IPR015425 -
Pral4210g00056 424 Coils Coil 292 319 - -
Pral4210g00056 424 Gene3D Formin, FH2 domain 31 423 IPR042201 -
Pral4210g00056 424 MobiDBLite consensus disorder prediction 402 416 - -
Pral4210g00056 424 PANTHER FORMIN-J 16 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00056 Pral-Chr4210 295256 298452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00056 9 413 FH2 protein (formin) Gene Family AT5G07740 70.098 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00056 - - pcin:129319991 697.197