Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00045 ATGGAGACTGAGGAACTTAATTTGAACAAAGAATCTGTTGTTGTTGCTGGAAGTAATAGTAAGTGTGGCGATGGATTCATCGATAGAAGCAAAGTCAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAGGTGTTTACGCTTCTCTTGAAGTGCTCTTATCAGGTTACTTCAGTGAGGTCAGCAAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTTGACCTCCCCATGAAGAAGGGTTTGAAGTTGTTGAAGTACATCGCACGAGACAATGAGCTGCGCCGAATCCCTGTTATAATGATGTCGGCACAAGACGAGGTATCCATTGTTGTTAAGTGCTTAAAACTCGGAGCAGCTGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAGCTATGACTTCGACCTGGTTGTATCAGATCCTAGTGACGCTAATACAAACAGCACCACCTTGTTCTCAGATGATACAGATGACAAGTCCAAAAGGAGCACTAATCCTGAGACTGGAATGCCTATCCAACAGGAACATGAGTCGACTGTTGCTGTTGCCTCTGCTGCTTTAGTTGTTGAGGAGCCTCCAAATGCTCGAGCATCAAAATATCGCCCTGAAGTTCCTGGGATTAGTGATCGCCGAACTGGACATTTTTCGGCTGGTCCCAAGAAGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACTTACGTTAAAGCAGCCGCAATGAAGAGCAACTCCCCACCAGTCTATGTCGATCGTGGGGCTGCTACACATTTGAGGATGGAAGATACACATCAAGCATGCACTCAACAAGGGGCTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAGGATGACTTGCCCAGCAGTAATAGCATCCCAGATTCTTTCTCCATTGAAAGGTCTTCTACTCCTCCTGCATCAATGGAGACTTCGCAGCAAAAACACTTCATGGAAGAAGCTTTGACTCAGGGGGTTGTTAATCCCATTATGATGCCATCTTCAGCACAATTGTACCAGAAGAATCTCCAGGACCTGCAAGCCCATGCTGGTACAGCTGTCATTCCACAATACAATCATCTTTCACAATGCCCTCCTCATACAACGGGCATGACATCCTTCCCATATTACCCAATGGGTATATGCTTACCGCCTGGACAGATGTCTTCTGTTCATTCATGGCCATCATTTGGTAGTCCGAGCTCATCTGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCGGCATTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATCAGATACGTCAATAGGAAACGACTTGCTGAACGACGGCCACGGGTAAGAGGACAATTTGTTAGAAAGTTGAATGGCGTAAATGTAGATCTTAATGGCCAACCTGTTTCCACCGACTACGATGAGGATGATGATGAAGATGAAGAGGATCATGCAGCGCCAGATTCCTCTCCTGAGGATGCTTAA 1602 0.4438 METEELNLNKESVVVAGSNSKCGDGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGLKLLKYIARDNELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSTNPETGMPIQQEHESTVAVASAALVVEEPPNARASKYRPEVPGISDRRTGHFSAGPKKSELKIGESSAFFTYVKAAAMKSNSPPVYVDRGAATHLRMEDTHQACTQQGANDLQIHENGETCESHSQDDLPSSNSIPDSFSIERSSTPPASMETSQQKHFMEEALTQGVVNPIMMPSSAQLYQKNLQDLQAHAGTAVIPQYNHLSQCPPHTTGMTSFPYYPMGICLPPGQMSSVHSWPSFGSPSSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPVSTDYDEDDDEDEEDHAAPDSSPEDA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00045 533 MobiDBLite consensus disorder prediction 498 533 - -
Pral4210g00045 533 MobiDBLite consensus disorder prediction 180 212 - -
Pral4210g00045 533 SMART REC_2 32 147 IPR001789 GO:0000160
Pral4210g00045 533 MobiDBLite consensus disorder prediction 509 533 - -
Pral4210g00045 533 MobiDBLite consensus disorder prediction 318 353 - -
Pral4210g00045 533 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Pral4210g00045 533 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 244 IPR045279 GO:0009736
Pral4210g00045 533 MobiDBLite consensus disorder prediction 228 256 - -
Pral4210g00045 533 SUPERFAMILY CheY-like 28 157 IPR011006 -
Pral4210g00045 533 MobiDBLite consensus disorder prediction 238 253 - -
Pral4210g00045 533 ProSiteProfiles CCT domain profile. 453 495 IPR010402 GO:0005515
Pral4210g00045 533 Gene3D - 32 232 - -
Pral4210g00045 533 MobiDBLite consensus disorder prediction 322 353 - -
Pral4210g00045 533 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Pral4210g00045 533 Pfam CCT motif 453 495 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00045 Pral-Chr4210 264971 270553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00045 21 532 Response Regulator Gene Family AT5G61380 51.064 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral4210g00045 Response_reg 2.4e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00045 K12127 - gmx:100786522 787.719