Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00044 ATGGAGACTGAGGAACTTAATTTGAACAAAGAATCTGTTGTTGTTGCTGGAAGTAATAGTAAGTGTGGCGATGGATTCATCGATAGAAGCAAAGTCAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAGGTGTTTACGCTTCTCTTGAAGTGCTCTTATCAGGTTACTTCAGTGAGGTCAGCAAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTTGACCTCCCCATGAAGAAGGGTTTGAAGTTGTTGAAGTACATCGCACGAGACAATGAGCTGCGCCGAATCCCTGTTATAATGATGTCGGCACAAGACGAGGTATCCATTGTTGTTAAGTGCTTAAAACTCGGAGCAGCTGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAGCTATGACTTCGACCTGGTTGTATCAGATCCTAGTGACGCTAATACAAACAGCACCACCTTGTTCTCAGATGATACAGATGACAAGTCCAAAAGGAGCACTAATCCTGAGACTGGAATGCCTATCCAACAGGAACATGAGTCGACTGTTGCTGTTGCCTCTGCTGCTTTAGTTGTTGAGGAGCCTCCAAATGCTCGAGCATCAAAATATCGCCCTGAAGTTCCTGGGATTAGTGATCGCCGAACTGGACATTTTTCGGCTGGTCCCAAGAAGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACTTACGTTAAAGCAGCCGCAATGAAGAGCAACTCCCCACCAGTCTATGTCGATCGTGGGGCTGCTACACATTTGAGGATGGAAGATACACATCAAGCATGCACTCAACAAGGGGCTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAGGATGACTTGCCCAGCAGTAATAGCATCCCAGATTCTTTCTCCATTGAAAGGTCTTCTACTCCTCCTGCATCAATGGAGACTTCGCAGCAAAAACACTTCATGGAAGAAGCTTTGACTCAGGGTATGATCCATCCAAGAAATGGAACTCATAATTCTGAACTTGAAGTATCCGGCATGCCTGGCCAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATTATGATGCCATCTTCAGCACAATTGTACCAGAAGAATCTCCAGGACCTGCAAGCCCATGCTGGTACAGCTGTCATTCCACAATACAATCATCTTTCACAATGCCCTCCTCATACAACGGGCATGACATCCTTCCCATATTACCCAATGGGTATATGCTTACCGCCTGGACAGATGTCTTCTGTTCATTCATGGCCATCATTTGGTAGTCCGAGCTCATCTGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCGGCATTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATCAGATACGTCAATAGGAAACGACTTGCTGAACGACGGCCACGGGTAAGAGGACAATTTGTTAGAAAGTTGAATGGCGTAAATGTAGATCTTAATGGCCAACCTGTTTCCACCGACTACGATGAGGATGATGATGAAGATGAAGAGGATCATGCAGCGCCAGATTCCTCTCCTGAGGATGCTTAA 1692 0.4403 METEELNLNKESVVVAGSNSKCGDGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGLKLLKYIARDNELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSTNPETGMPIQQEHESTVAVASAALVVEEPPNARASKYRPEVPGISDRRTGHFSAGPKKSELKIGESSAFFTYVKAAAMKSNSPPVYVDRGAATHLRMEDTHQACTQQGANDLQIHENGETCESHSQDDLPSSNSIPDSFSIERSSTPPASMETSQQKHFMEEALTQGMIHPRNGTHNSELEVSGMPGQHHYPYYISGVVNPIMMPSSAQLYQKNLQDLQAHAGTAVIPQYNHLSQCPPHTTGMTSFPYYPMGICLPPGQMSSVHSWPSFGSPSSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPVSTDYDEDDDEDEEDHAAPDSSPEDA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00044 563 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 295 IPR045279 GO:0009736
Pral4210g00044 563 MobiDBLite consensus disorder prediction 180 212 - -
Pral4210g00044 563 SMART REC_2 32 147 IPR001789 GO:0000160
Pral4210g00044 563 Gene3D - 32 232 - -
Pral4210g00044 563 MobiDBLite consensus disorder prediction 318 353 - -
Pral4210g00044 563 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Pral4210g00044 563 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Pral4210g00044 563 ProSiteProfiles CCT domain profile. 483 525 IPR010402 GO:0005515
Pral4210g00044 563 MobiDBLite consensus disorder prediction 228 256 - -
Pral4210g00044 563 MobiDBLite consensus disorder prediction 238 253 - -
Pral4210g00044 563 MobiDBLite consensus disorder prediction 528 563 - -
Pral4210g00044 563 SUPERFAMILY CheY-like 28 157 IPR011006 -
Pral4210g00044 563 MobiDBLite consensus disorder prediction 539 563 - -
Pral4210g00044 563 Pfam CCT motif 483 525 IPR010402 GO:0005515
Pral4210g00044 563 MobiDBLite consensus disorder prediction 322 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00044 Pral-Chr4210 264971 270553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00044 21 562 Response Regulator Gene Family AT5G61380 51.115 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral4210g00044 Response_reg 2.7e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00044 K12127 - gmx:100786522 833.943