Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00038 ATGGAGAATGTTGTGGGGCTGTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCTGGTTTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCAGTACCTGTACAAGAAGGTCACTGATTCCAACTTCTCAGCTAGGGCCATTGGGGAGGTGGACTTGAACAGGTCTGAGCCTTGGGATTTGCCATGGAAAGCCAAAATGGGAGAAAAGGAGTGGTACTTCTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAAAGAGATCTACAGAGGAAAATCGCTGGTTGGAATGAAGAAAACTCTGGTTTTCTACAGAGGAAGAGCACCCAAAGGAGAGAAAACCAACTGGGTCATGCACGAATACAGATTAGAGGGTAAATTCTCCGTCCACAACCTCCCTAAAACCGCGAAGAATGAGTGGGTGATATGCAGGGTTTTTCAAAAAGGTTCGAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGCTGGATTCTCTTGGGAATGAATTGGGTTCTTCTGGCTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAACAAAACCAAACCTGTCGCAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGCTCAGATCAGAAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACTTCCCTAATTATGGGGTTTCTTCGAATCCCTCAGACACCCTTCCCAGAATCCCAATTTCTGGTTCGTTATATTCCACTCAACCACATCAAGCTCCTTCAAGTTTAGCCCTACCCAATTCTATTTATGGCCTGCAAGACCAGACCCTCCTCAGGGCCTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGAGGGACATGGTCAGTGTGTCCCAAGAAACAGGTCTTACCACTGACATGAACCCCGAAATCTCCTCGGTCGTGTCGAATCTTGACATGAGTCGCAGAACCTTCGACAATCAGCAGCCGCAACCAACTGCCTCATCTGCAGCAATGGACTATGAAGGTTTGTGGACTTACCGAGTTTAA 1098 0.4654 MENVVGLCKEEEKMNLPPGFRFHPTDEELISQYLYKKVTDSNFSARAIGEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKTKPVAESAYVPCFSNPIDAQIRNNQGGIFDSYSNFPNYGVSSNPSDTLPRIPISGSLYSTQPHQAPSSLALPNSIYGLQDQTLLRALLENQESNRNNFKPERDMVSVSQETGLTTDMNPEISSVVSNLDMSRRTFDNQQPQPTASSAAMDYEGLWTYRV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00038 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 295 - -
Pral4210g00038 365 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Pral4210g00038 365 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Pral4210g00038 365 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pral4210g00038 365 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Pral4210g00038 365 FunFam NAC domain-containing protein 100-like 25 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00038 Pral-Chr4210 200869 202927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00038 14 363 NAC Transcription Factor Family AT5G07680 59.091 1.99e-131 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4210g00038 NAM 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00038 - - qsa:O6P43_022865 568.54