Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4210g00027 ATGAGGTTCACACTGAACGAGGTGGTAACCGATAAGAACACATCTTGGAGCATGATGATGATGGGGAATCAGAGTCAGCCACTCGTGGGATGGAATGCTAAGAATGAATACGATGAAGTTCCATTCCCTCTCCCATATCCATTACCTTCATCTGACTTCAGCGGAAATGGCAATGGATATTTTGGACTGGATTGGGCTGATGAGTTTGCCGCACCTTGGACGGAACCGGATGCTTTGTATGAAACCCTGGCCATTGAGCCAACACCGAGCGTGCAAGACTATGACTTTTACGACATTAAAAAGGGACTAGCAATATGGAATGAGATTGACCATGGGTTTGATTCAAATAAGCCTGTTTATGTGGCCTGCAATAATGAAGAAAGGGGGAAGGAAGTGAAGGAGGAAAGGGAGGTGAAACGATCAGGCCGAGAAGAGAGAAGTGGCAGCACCAAATTGTTGTCAAGGAAGACTATTTCTCAGTACTTCTATATGCCCATCACACAGGCGGCAAGGGAGCTTAATGTGGGCCTCACACTTTTGAAAAAAAGATGCAGGGAATTGGGAATTAGAAGATGGCCGCATAGGAAACTGATGAGCCTTCAAACCTTGATAAACAATGTAAAGGAGCTAGGGCAAGAGGGGGGCCAGGAAAGTGAAGAGAAACTGAGGAATGCGCTTGAGATATTGGCGAAGGAAAAGAAGCTGATGGAGGAGATGCCAGATTTGCAGCTTGAGGATAACACAAAGAGACTCAGACAAGCTTGCTTCAAAGCCAACTACAAGAAAAGGAAGATCATGGGATCCTCAATGGAATCAGAGTCTTCAGCGAGTGAATATAATTATGACGATCAACTACATGACATCAAGCATCTGTTGCCATCCATCCCTTCCCATTTTACATCATAA 906 0.4492 MRFTLNEVVTDKNTSWSMMMMGNQSQPLVGWNAKNEYDEVPFPLPYPLPSSDFSGNGNGYFGLDWADEFAAPWTEPDALYETLAIEPTPSVQDYDFYDIKKGLAIWNEIDHGFDSNKPVYVACNNEERGKEVKEEREVKRSGREERSGSTKLLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVKELGQEGGQESEEKLRNALEILAKEKKLMEEMPDLQLEDNTKRLRQACFKANYKKRKIMGSSMESESSASEYNYDDQLHDIKHLLPSIPSHFTS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4210g00027 301 MobiDBLite consensus disorder prediction 132 151 - -
Pral4210g00027 301 ProSiteProfiles RWP-RK domain profile. 134 220 IPR003035 -
Pral4210g00027 301 Pfam RWP-RK domain 153 200 IPR003035 -
Pral4210g00027 301 Coils Coil 219 239 - -
Pral4210g00027 301 PANTHER PROTEIN RKD4 129 275 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4210g00027 Pral-Chr4210 143558 145090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4210g00027 140 269 AtRKD Transcription Factor Family AT1G18790 69.925 8.49e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pral4210g00027 RWP-RK 5.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4210g00027 - - pcin:129319730 387.497